Difference between revisions of "RXN0-5393"

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(Created page with "Category:Gene == Gene Ec-20_003120 == * left end position: ** 3227044 * transcription direction: ** NEGATIVE * right end position: ** 3235173 * centisome position: ** 62.5...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4OHBENZOATE-OCTAPRENYLTRANSFER-RXN 4OHBENZOATE-OCTAPRENYLTRANSFER-RXN] == * direction: ** LEFT-TO-R...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-20_003120 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4OHBENZOATE-OCTAPRENYLTRANSFER-RXN 4OHBENZOATE-OCTAPRENYLTRANSFER-RXN] ==
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* left end position:
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* direction:
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** 3227044
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** UbiA prenyltransferase family
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* right end position:
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** 4-hydroxybenzoate nonaprenyltransferase
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** 3235173
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.5.1.39 EC-2.5.1.39]
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** 62.583015   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0123_0042
 
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** Esi0123_0042
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[4.2.2.10-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[OCTAPRENYL-DIPHOSPHATE]][c] '''+''' 1 [[4-hydroxybenzoate]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[3-OCTAPRENYL-4-HYDROXYBENZOATE]][c]
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***automated-name-match
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* With common name(s):
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* [[RXN-14897]]
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** 1 all-trans-octaprenyl diphosphate[c] '''+''' 1 4-hydroxybenzoate[c] '''=>''' 1 diphosphate[c] '''+''' 1 3-octaprenyl-4-hydroxybenzoate[c]
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** esiliculosus_genome
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***automated-name-match
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-7243]]
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* Gene: [[Ec-24_003910]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-00_007360]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-00_007350]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-25_002110]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[PWY-6708]], ubiquinol-8 biosynthesis (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6708 PWY-6708]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5870]], ubiquinol-8 biosynthesis (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5870 PWY-5870]
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** '''2''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=3227044}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27782 27782]
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{{#set: right end position=3235173}}
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* LIGAND-RXN:
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{{#set: centisome position=62.583015    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R05615 R05615]
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{{#set: common name=Esi_0123_0042|Esi0123_0042}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=4.2.2.10-RXN|RXN-14897}}
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{{#set: common name=UbiA prenyltransferase family}}
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{{#set: pathway associated=PWY-7243}}
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{{#set: common name=4-hydroxybenzoate nonaprenyltransferase}}
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{{#set: ec number=EC-2.5.1.39}}
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{{#set: gene associated=Ec-24_003910|Ec-00_007360|Ec-00_007350|Ec-25_002110}}
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{{#set: in pathway=PWY-6708|PWY-5870}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:52, 21 March 2018

Reaction 4OHBENZOATE-OCTAPRENYLTRANSFER-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • UbiA prenyltransferase family
    • 4-hydroxybenzoate nonaprenyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6708, ubiquinol-8 biosynthesis (prokaryotic): PWY-6708
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5870, ubiquinol-8 biosynthesis (eukaryotic): PWY-5870
    • 2 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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