Difference between revisions of "Ec-06 002830"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14570 RXN-14570] == * direction: ** LEFT-TO-RIGHT * common name: ** Kae1/YgjD family * ec numbe...")
(Created page with "Category:Gene == Gene Ec-05_000260 == * left end position: ** 711834 * transcription direction: ** NEGATIVE * right end position: ** 719400 * centisome position: ** 7.8193...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14570 RXN-14570] ==
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== Gene Ec-05_000260 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 711834
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* common name:
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* transcription direction:
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** Kae1/YgjD family
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.3.1.234 EC-2.3.1.234]
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** 719400
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* centisome position:
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** 7.819341   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0249_0032
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** Esi0249_0032
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ACID-PHOSPHATASE-RXN]]
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** 1 [[tRNA-adenine-37]][c] '''+''' 1 [[CPD-15435]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[N6-L-threonylcarbamoyladenine37-tRNAs]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 an adenine37 in tRNA[c] '''+''' 1 L-threonylcarbamoyladenylate[c] '''=>''' 1 AMP[c] '''+''' 1 H+[c] '''+''' 1 N6-L-threonylcarbamoyladenine37 in tRNA[c]
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* Reaction: [[RXN-5822]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-20_001490]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY0-1587]], N6-L-threonylcarbamoyladenosine37-modified tRNA biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1587 PWY0-1587]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY-6348]]
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* [[PWY-5083]]
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* [[NADPHOS-DEPHOS-PWY]]
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* [[NAD-BIOSYNTHESIS-II]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=711834}}
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{{#set: common name=Kae1/YgjD family}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: ec number=EC-2.3.1.234}}
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{{#set: right end position=719400}}
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{{#set: gene associated=Ec-20_001490}}
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{{#set: centisome position=7.819341    }}
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{{#set: in pathway=PWY0-1587}}
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{{#set: common name=Esi_0249_0032|Esi0249_0032}}
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{{#set: reconstruction category=annotation}}
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{{#set: reaction associated=ACID-PHOSPHATASE-RXN|RXN-5822}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: pathway associated=PWY-6348|PWY-5083|NADPHOS-DEPHOS-PWY|NAD-BIOSYNTHESIS-II}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 14:53, 21 March 2018

Gene Ec-05_000260

  • left end position:
    • 711834
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 719400
  • centisome position:
    • 7.819341
  • Synonym(s):
    • Esi_0249_0032
    • Esi0249_0032

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-06_002830&oldid=22511"