Difference between revisions of "RNA-Holder"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Trans-D2-decenoyl-ACPs Trans-D2-decenoyl-ACPs] == * common name: ** a (2E)-dec-2-enoyl-[acp] *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASNSYNA-RXN ASNSYNA-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** asparagine synthase (gl...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Trans-D2-decenoyl-ACPs Trans-D2-decenoyl-ACPs] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASNSYNA-RXN ASNSYNA-RXN] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** a (2E)-dec-2-enoyl-[acp]
+
** asparagine synthase (glutamine-hydrolyzing)
 +
** Asparagine synthase, glutamine-hydrolyzing
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/6.3.1.1 EC-6.3.1.1]
 
* Synonym(s):
 
* Synonym(s):
−
** a trans-Δ2-decenoyl-[acp]
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[RXN-9660]]
+
* With identifiers:
−
== Reaction(s) known to produce the compound ==
+
** 1 [[L-ASPARTATE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ASN]][c]
−
* [[RXN-9655]]
+
* With common name(s):
−
== Reaction(s) of unknown directionality ==
+
** 1 L-aspartate[c] '''+''' 1 ammonium[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 H+[c] '''+''' 1 L-asparagine[c]
−
* [[5.3.3.14-RXN]]
+
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-15_004750]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-28_000990]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-15_003670]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
== Pathways  ==
 +
* [[ASPARAGINESYN-PWY]], L-asparagine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINESYN-PWY ASPARAGINESYN-PWY]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=a (2E)-dec-2-enoyl-[acp]}}
+
* RHEA:
−
{{#set: common name=a trans-Δ2-decenoyl-[acp]}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11372 11372]
−
{{#set: consumed by=RXN-9660}}
+
* LIGAND-RXN:
−
{{#set: produced by=RXN-9655}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00483 R00483]
−
{{#set: reversible reaction associated=5.3.3.14-RXN}}
+
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P00963 P00963]
 +
** [http://www.uniprot.org/uniprot/P08243 P08243]
 +
** [http://www.uniprot.org/uniprot/P44338 P44338]
 +
** [http://www.uniprot.org/uniprot/P49088 P49088]
 +
** [http://www.uniprot.org/uniprot/P54264 P54264]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=asparagine synthase (glutamine-hydrolyzing)}}
 +
{{#set: common name=Asparagine synthase, glutamine-hydrolyzing}}
 +
{{#set: ec number=EC-6.3.1.1}}
 +
{{#set: gene associated=Ec-15_004750|Ec-28_000990|Ec-15_003670}}
 +
{{#set: in pathway=ASPARAGINESYN-PWY}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:53, 21 March 2018

Reaction ASNSYNA-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • asparagine synthase (glutamine-hydrolyzing)
    • Asparagine synthase, glutamine-hydrolyzing
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-aspartate[c] + 1 ammonium[c] + 1 ATP[c] => 1 diphosphate[c] + 1 AMP[c] + 1 H+[c] + 1 L-asparagine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RNA-Holder&oldid=22512"