Difference between revisions of "Ec-16 001000"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Ec-24_000030 == * left end position: ** 38402 * transcription direction: ** NEGATIVE * right end position: ** 43143 * centisome position: ** 0.769938...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.4.4-RXN 1.2.4.4-RXN] == * direction: ** REVERSIBLE * common name: ** Dehydrogenase, E1 componen...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Ec-24_000030 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.4.4-RXN 1.2.4.4-RXN] ==
−
* left end position:
+
* direction:
−
** 38402
+
** REVERSIBLE
−
* transcription direction:
+
* common name:
−
** NEGATIVE
+
** Dehydrogenase, E1 component
−
* right end position:
+
** Branched chain alpha-keto acid dehydrogenase E1 beta subunit
−
** 43143
+
* ec number:
−
* centisome position:
+
** [http://enzyme.expasy.org/EC/1.2.4.4 EC-1.2.4.4]
−
** 0.76993835   
+
 
* Synonym(s):
 
* Synonym(s):
−
** Esi_0178_0007
 
−
** Esi0178_0007
 
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[2.4.1.151-RXN]]
+
* With identifiers:
−
** esiliculosus_genome
+
** 1 [[BCAA-dehydrogenase-lipoyl]][c] '''+''' 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[BCAA-dehydrogenase-2MP-DH-lipoyl]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
−
***go-term
+
* With common name(s):
−
== Pathways associated ==
+
** 1 an [apo BCAA dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''+''' 1 3-methyl-2-oxobutanoate[c] '''+''' 1 H+[c] '''<=>''' 1 an [apo BCAA dehydrogenase E2 protein] N6-S-[2-methylpropanoyl]dihydrolipoyl-L-lysine[c] '''+''' 1 CO2[c]
−
* [[PWY-7434]]
+
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-06_009010]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-10_006360]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways ==
 +
* [[PWY-5046]], 2-oxoisovalerate decarboxylation to isobutanoyl-CoA: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5046 PWY-5046]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=38402}}
+
* LIGAND-RXN:
−
{{#set: transcription direction=NEGATIVE}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01701 R01701]
−
{{#set: right end position=43143}}
+
* UNIPROT:
−
{{#set: centisome position=0.76993835    }}
+
** [http://www.uniprot.org/uniprot/P21839 P21839]
−
{{#set: common name=Esi_0178_0007|Esi0178_0007}}
+
** [http://www.uniprot.org/uniprot/P21953 P21953]
−
{{#set: reaction associated=2.4.1.151-RXN}}
+
** [http://www.uniprot.org/uniprot/P37940 P37940]
−
{{#set: pathway associated=PWY-7434}}
+
** [http://www.uniprot.org/uniprot/Q9PK54 Q9PK54]
 +
** [http://www.uniprot.org/uniprot/P37941 P37941]
 +
** [http://www.uniprot.org/uniprot/P11178 P11178]
 +
** [http://www.uniprot.org/uniprot/P12694 P12694]
 +
** [http://www.uniprot.org/uniprot/P09061 P09061]
 +
** [http://www.uniprot.org/uniprot/P09060 P09060]
 +
** [http://www.uniprot.org/uniprot/P11960 P11960]
 +
** [http://www.uniprot.org/uniprot/O84344 O84344]
 +
** [http://www.uniprot.org/uniprot/Q9Z9E8 Q9Z9E8]
 +
** [http://www.uniprot.org/uniprot/Q9I1M2 Q9I1M2]
 +
** [http://www.uniprot.org/uniprot/P35738 P35738]
 +
** [http://www.uniprot.org/uniprot/P50136 P50136]
 +
** [http://www.uniprot.org/uniprot/O48615 O48615]
 +
** [http://www.uniprot.org/uniprot/O03849 O03849]
 +
** [http://www.uniprot.org/uniprot/Q53592 Q53592]
 +
** [http://www.uniprot.org/uniprot/Q53593 Q53593]
 +
** [http://www.uniprot.org/uniprot/O82450 O82450]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Dehydrogenase, E1 component}}
 +
{{#set: common name=Branched chain alpha-keto acid dehydrogenase E1 beta subunit}}
 +
{{#set: ec number=EC-1.2.4.4}}
 +
{{#set: gene associated=Ec-06_009010|Ec-10_006360}}
 +
{{#set: in pathway=PWY-5046}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:53, 21 March 2018

Reaction 1.2.4.4-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Dehydrogenase, E1 component
    • Branched chain alpha-keto acid dehydrogenase E1 beta subunit
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5046, 2-oxoisovalerate decarboxylation to isobutanoyl-CoA: PWY-5046
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-16_001000&oldid=22568"