Difference between revisions of "S-3-HYDROXYBUTANOYL-COA"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNDECARBOX-RXN ORNDECARBOX-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Ornithine decar...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYCLOARTENOL-SYNTHASE-RXN CYCLOARTENOL-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNDECARBOX-RXN ORNDECARBOX-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYCLOARTENOL-SYNTHASE-RXN CYCLOARTENOL-SYNTHASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Ornithine decarboxylase
+
** Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
 +
** Prenyltransferase/squalene oxidase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.1.1.17 EC-4.1.1.17]
+
** [http://enzyme.expasy.org/EC/5.4.99.8 EC-5.4.99.8]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[L-ORNITHINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PUTRESCINE]][c]
+
** 1 [[EPOXYSQUALENE]][c] '''=>''' 1 [[CYCLOARTENOL]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-ornithine[c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 putrescine[c]
+
** 1 (3S)-2,3-epoxy-2,3-dihydrosqualene[c] '''=>''' 1 cycloartenol[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-11_003270]]
+
* Gene: [[Ec-07_006170]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-00_010980]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[ORNDEG-PWY]], superpathway of ornithine degradation: [http://metacyc.org/META/NEW-IMAGE?object=ORNDEG-PWY ORNDEG-PWY]
+
* [[PWY-7154]], ergosterol biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7154 PWY-7154]
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-6305]], putrescine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6305 PWY-6305]
+
* [[PWY-2541]], plant sterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2541 PWY-2541]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''10''' reactions found over '''36''' reactions in the full pathway
−
* [[PWY-46]], putrescine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-46 PWY-46]
+
* [[PWY-6098]], diploterol and cycloartenol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6098 PWY-6098]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6109]], mangrove triterpenoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6109 PWY-6109]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7155]], 7-dehydroporiferasterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7155 PWY-7155]
 +
** '''4''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6115]], avenacin biosynthesis, initial reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6115 PWY-6115]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22964 22964]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21311 21311]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00670 R00670]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03200 R03200]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P24169 P24169]
+
** [http://www.uniprot.org/uniprot/O23909 O23909]
−
** [http://www.uniprot.org/uniprot/P27121 P27121]
+
−
** [http://www.uniprot.org/uniprot/P27116 P27116]
+
−
** [http://www.uniprot.org/uniprot/P27120 P27120]
+
−
** [http://www.uniprot.org/uniprot/P43099 P43099]
+
−
** [http://www.uniprot.org/uniprot/Q9X2I6 Q9X2I6]
+
−
** [http://www.uniprot.org/uniprot/P08432 P08432]
+
−
** [http://www.uniprot.org/uniprot/P27118 P27118]
+
−
** [http://www.uniprot.org/uniprot/P11926 P11926]
+
−
** [http://www.uniprot.org/uniprot/P14019 P14019]
+
−
** [http://www.uniprot.org/uniprot/P00860 P00860]
+
−
** [http://www.uniprot.org/uniprot/P09057 P09057]
+
−
** [http://www.uniprot.org/uniprot/Q9TZZ6 Q9TZZ6]
+
−
** [http://www.uniprot.org/uniprot/P44317 P44317]
+
−
** [http://www.uniprot.org/uniprot/O66940 O66940]
+
−
** [http://www.uniprot.org/uniprot/P27119 P27119]
+
−
** [http://www.uniprot.org/uniprot/P49725 P49725]
+
−
** [http://www.uniprot.org/uniprot/P50134 P50134]
+
−
** [http://www.uniprot.org/uniprot/P93351 P93351]
+
−
** [http://www.uniprot.org/uniprot/P93357 P93357]
+
−
** [http://www.uniprot.org/uniprot/O15696 O15696]
+
−
** [http://www.uniprot.org/uniprot/Q84527 Q84527]
+
−
** [http://www.uniprot.org/uniprot/P41931 P41931]
+
−
** [http://www.uniprot.org/uniprot/O69865 O69865]
+
−
** [http://www.uniprot.org/uniprot/Q9UQW9 Q9UQW9]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Ornithine decarboxylase}}
+
{{#set: common name=Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid}}
−
{{#set: ec number=EC-4.1.1.17}}
+
{{#set: common name=Prenyltransferase/squalene oxidase}}
−
{{#set: gene associated=Ec-11_003270}}
+
{{#set: ec number=EC-5.4.99.8}}
−
{{#set: in pathway=ORNDEG-PWY|PWY-6305|PWY-46}}
+
{{#set: gene associated=Ec-07_006170|Ec-00_010980}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: in pathway=PWY-7154|PWY-2541|PWY-6098|PWY-6109|PWY-7155|PWY-6115}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 13:54, 21 March 2018

Reaction CYCLOARTENOL-SYNTHASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
    • Prenyltransferase/squalene oxidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (3S)-2,3-epoxy-2,3-dihydrosqualene[c] => 1 cycloartenol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7154, ergosterol biosynthesis II: PWY-7154
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-2541, plant sterol biosynthesis: PWY-2541
    • 10 reactions found over 36 reactions in the full pathway
  • PWY-6098, diploterol and cycloartenol biosynthesis: PWY-6098
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6109, mangrove triterpenoid biosynthesis: PWY-6109
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-7155, 7-dehydroporiferasterol biosynthesis: PWY-7155
    • 4 reactions found over 10 reactions in the full pathway
  • PWY-6115, avenacin biosynthesis, initial reactions: PWY-6115
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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