Difference between revisions of "CPD-3481"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SIROHEME-FERROCHELAT-RXN SIROHEME-FERROCHELAT-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
(Created page with "Category:Gene == Gene Ec-15_002870 == * left end position: ** 3087197 * transcription direction: ** NEGATIVE * right end position: ** 3097755 * centisome position: ** 57.1...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SIROHEME-FERROCHELAT-RXN SIROHEME-FERROCHELAT-RXN] ==
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== Gene Ec-15_002870 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3087197
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* common name:
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* transcription direction:
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** Cobalamin (vitamin B12) biosynthesis CbiX
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/4.99.1.4 EC-4.99.1.4]
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** 3097755
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* centisome position:
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** 57.188816   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0076_0071
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** Esi0076_0071
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[2.4.1.223-RXN]]
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** 1 [[FE+2]][c] '''+''' 1 [[SIROHYDROCHLORIN]][c] '''=>''' 1 [[SIROHEME]][c] '''+''' 2 [[PROTON]][c]
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* With common name(s):
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** 1 Fe2+[c] '''+''' 1 sirohydrochlorin[c] '''=>''' 1 siroheme[c] '''+''' 2 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-10_002430]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-5194]], siroheme biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5194 PWY-5194]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY-6558]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=3087197}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24360 24360]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=3097755}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02864 R02864]
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{{#set: centisome position=57.188816    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0076_0071|Esi0076_0071}}
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{{#set: common name=Cobalamin (vitamin B12) biosynthesis CbiX}}
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{{#set: reaction associated=2.4.1.223-RXN}}
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{{#set: ec number=EC-4.99.1.4}}
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{{#set: pathway associated=PWY-6558}}
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{{#set: gene associated=Ec-10_002430}}
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{{#set: in pathway=PWY-5194}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:54, 21 March 2018

Gene Ec-15_002870

  • left end position:
    • 3087197
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3097755
  • centisome position:
    • 57.188816
  • Synonym(s):
    • Esi_0076_0071
    • Esi0076_0071

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CPD-3481&oldid=22678"