Difference between revisions of "RXN-14024"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PHYTYL-PYROPHOSPHATE PHYTYL-PYROPHOSPHATE] == * smiles: ** CC(CCCC(CCCC(CCCC(=CCOP([O-])(=O)OP(...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SIROHEME-FERROCHELAT-RXN SIROHEME-FERROCHELAT-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PHYTYL-PYROPHOSPHATE PHYTYL-PYROPHOSPHATE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SIROHEME-FERROCHELAT-RXN SIROHEME-FERROCHELAT-RXN] ==
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* smiles:
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* direction:
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** CC(CCCC(CCCC(CCCC(=CCOP([O-])(=O)OP([O-])(=O)[O-])C)C)C)C
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=ITPLBNCCPZSWEU-PYDDKJGSSA-K
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* common name:
 
* common name:
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** phytyl diphosphate
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** Cobalamin (vitamin B12) biosynthesis CbiX
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* molecular weight:
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* ec number:
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** 453.471   
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** [http://enzyme.expasy.org/EC/4.99.1.4 EC-4.99.1.4]
 
* Synonym(s):
 
* Synonym(s):
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** phytyl pyrophosphate
 
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** phytyl-PP
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-2541]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[FE+2]][c] '''+''' 1 [[SIROHYDROCHLORIN]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[SIROHEME]][c]
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* [[RXN-7660]]
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* With common name(s):
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* [[RXN-10625]]
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** 1 Fe2+[c] '''+''' 1 sirohydrochlorin[c] '''=>''' 2 H+[c] '''+''' 1 siroheme[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-10_002430]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-5194]], siroheme biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5194 PWY-5194]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=71728454 71728454]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24360 24360]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=75434 75434]
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** [http://www.genome.jp/dbget-bin/www_bget?R02864 R02864]
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* LIGAND-CPD:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.genome.jp/dbget-bin/www_bget?C05427 C05427]
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{{#set: common name=Cobalamin (vitamin B12) biosynthesis CbiX}}
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{{#set: smiles=CC(CCCC(CCCC(CCCC(=CCOP([O-])(=O)OP([O-])(=O)[O-])C)C)C)C}}
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{{#set: ec number=EC-4.99.1.4}}
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{{#set: inchi key=InChIKey=ITPLBNCCPZSWEU-PYDDKJGSSA-K}}
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{{#set: gene associated=Ec-10_002430}}
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{{#set: common name=phytyl diphosphate}}
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{{#set: in pathway=PWY-5194}}
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{{#set: molecular weight=453.471    }}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=phytyl pyrophosphate|phytyl-PP}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: consumed by=RXN-2541}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: produced by=RXN-7660|RXN-10625}}
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Revision as of 14:54, 21 March 2018

Reaction SIROHEME-FERROCHELAT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Cobalamin (vitamin B12) biosynthesis CbiX
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5194, siroheme biosynthesis: PWY-5194
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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