Difference between revisions of "2.7.7.8-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9222 RXN-9222] == * direction: ** LEFT-TO-RIGHT * common name: ** 4-hydroxybenzoate nonaprenylt...")
(Created page with "Category:Gene == Gene Ec-21_002920 == * left end position: ** 3964445 * transcription direction: ** POSITIVE * right end position: ** 3978722 * centisome position: ** 53.7...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9222 RXN-9222] ==
+
== Gene Ec-21_002920 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 3964445
−
* common name:
+
* transcription direction:
−
** 4-hydroxybenzoate nonaprenyltransferase
+
** POSITIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/2.5.1.39 EC-2.5.1.39]
+
** 3978722
 +
* centisome position:
 +
** 53.7179   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0387_0012
 +
** Esi0387_0012
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[ADPREDUCT-RXN]]
−
** 1 [[ALL-TRANS-HEPTAPRENYL-DIPHOSPHATE]][c] '''+''' 1 [[4-hydroxybenzoate]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CPD-9852]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: go-term
−
** 1 all-trans-heptaprenyl diphosphate[c] '''+''' 1 4-hydroxybenzoate[c] '''=>''' 1 diphosphate[c] '''+''' 1 3-heptaprenyl-4-hydroxybenzoate[c]
+
** Source: [[orthology-aragem]]
−
 
+
* Reaction: [[CDPREDUCT-RXN]]
−
== Genes associated with this reaction  ==
+
** Source: [[annotation-esiliculosus_genome]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** Assignment: go-term
−
* [[Ec-00_007360]]
+
** Source: [[orthology-aragem]]
−
** ESILICULOSUS_GENOME
+
* Reaction: [[GDPREDUCT-RXN]]
−
***AUTOMATED-NAME-MATCH
+
** Source: [[annotation-esiliculosus_genome]]
−
== Pathways  ==
+
*** Assignment: go-term
−
* [[PWY-5873]], ubiquinol-7 biosynthesis (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5873 PWY-5873]
+
** Source: [[orthology-aragem]]
−
** '''1''' reactions found over '''8''' reactions in the full pathway
+
* Reaction: [[RIBONUCLEOSIDE-DIP-REDUCTI-RXN]]
−
* [[PWY-5855]], ubiquinol-7 biosynthesis (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5855 PWY-5855]
+
** Source: [[annotation-esiliculosus_genome]]
−
** '''1''' reactions found over '''8''' reactions in the full pathway
+
*** Assignment: go-term
−
== Reconstruction information  ==
+
* Reaction: [[RIBONUCLEOSIDE-DIP-REDUCTII-RXN]]
−
* Category: [[annotation]]
+
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[RXN0-722]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[RXN0-747]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[RXN0-748]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[UDPREDUCT-RXN]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: go-term
 +
** Source: [[orthology-aragem]]
 +
== Pathways associated ==
 +
* [[PWY-7210]]
 +
* [[PWY-7198]]
 +
* [[PWY-7220]]
 +
* [[PWY-7184]]
 +
* [[PWY-7222]]
 +
* [[PWY0-166]]
 +
* [[PWY-7227]]
 +
* [[PWY-7226]]
 +
* [[PWY-6545]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=3964445}}
−
{{#set: common name=4-hydroxybenzoate nonaprenyltransferase}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: ec number=EC-2.5.1.39}}
+
{{#set: right end position=3978722}}
−
{{#set: gene associated=Ec-00_007360}}
+
{{#set: centisome position=53.7179    }}
−
{{#set: in pathway=PWY-5873|PWY-5855}}
+
{{#set: common name=Esi_0387_0012|Esi0387_0012}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reaction associated=ADPREDUCT-RXN|CDPREDUCT-RXN|GDPREDUCT-RXN|RIBONUCLEOSIDE-DIP-REDUCTI-RXN|RIBONUCLEOSIDE-DIP-REDUCTII-RXN|RXN0-722|RXN0-747|RXN0-748|UDPREDUCT-RXN}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
{{#set: pathway associated=PWY-7210|PWY-7198|PWY-7220|PWY-7184|PWY-7222|PWY0-166|PWY-7227|PWY-7226|PWY-6545}}
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 13:55, 21 March 2018

Gene Ec-21_002920

  • left end position:
    • 3964445
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3978722
  • centisome position:
    • 53.7179
  • Synonym(s):
    • Esi_0387_0012
    • Esi0387_0012

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=2.7.7.8-RXN&oldid=22785"