Difference between revisions of "Oxidized-Plastocyanins"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10745 RXN-10745] == * direction: ** LEFT-TO-RIGHT * common name: ** FAD-binding 8 ** Riboflavin...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16136 RXN-16136] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10745 RXN-10745] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16136 RXN-16136] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** FAD-binding 8
 
−
** Riboflavin synthase-like beta-barrel
 
−
** Ferric reductase, NAD binding
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.6.3.1 EC-1.6.3.1]
+
** [http://enzyme.expasy.org/EC/1.1.1 EC-1.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
+
** 1 [[NAD]][c] '''+''' 1 [[CPD-17387]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[CPD-17388]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 oxygen[c] '''+''' 1 NAD(P)H[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 NAD(P)+[c]
+
** 1 NAD+[c] '''+''' 1 (3S)-hydroxy-(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c] '''=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 3-oxo-(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Ec-01_003990]]
 
−
** ESILICULOSUS_GENOME
 
−
***EC-NUMBER
 
−
* [[Ec-19_004010]]
 
−
** ESILICULOSUS_GENOME
 
−
***EC-NUMBER
 
−
* [[Ec-19_004000]]
 
−
** ESILICULOSUS_GENOME
 
−
***EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
 +
** '''14''' reactions found over '''14''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 34: Line 22:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11267 11267]
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11263 11263]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R07172 R07172]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=FAD-binding 8}}
+
{{#set: ec number=EC-1.1.1}}
−
{{#set: common name=Riboflavin synthase-like beta-barrel}}
+
{{#set: in pathway=PWY-7606}}
−
{{#set: common name=Ferric reductase, NAD binding}}
+
−
{{#set: ec number=EC-1.6.3.1}}
+
−
{{#set: gene associated=Ec-01_003990|Ec-19_004010|Ec-19_004000}}
+
−
{{#set: in pathway=}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:55, 21 March 2018

Reaction RXN-16136

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 (3S)-hydroxy-(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c] => 1 H+[c] + 1 NADH[c] + 1 3-oxo-(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c]

Genes associated with this reaction

Pathways

  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals): PWY-7606
    • 14 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Oxidized-Plastocyanins&oldid=22810"