Difference between revisions of "RXN-11999"
From metabolic_network
(Created page with "Category:Gene == Gene Ec-04_001890 == * Synonym(s): ** Esi_0015_0097 ** Esi0015_0097 == Reactions associated == * RXN-8443 ** pantograph-aragem == Pathways as...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SAMDECARB-RXN SAMDECARB-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** S-adenosylmethionin...") |
||
Line 1: | Line 1: | ||
− | [[Category: | + | [[Category:Reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SAMDECARB-RXN SAMDECARB-RXN] == |
+ | * direction: | ||
+ | ** LEFT-TO-RIGHT | ||
+ | * common name: | ||
+ | ** S-adenosylmethionine decarboxylase subgroup | ||
+ | ** S-Adenosylmethionine decarboxylase | ||
+ | * ec number: | ||
+ | ** [http://enzyme.expasy.org/EC/4.1.1.50 EC-4.1.1.50] | ||
* Synonym(s): | * Synonym(s): | ||
− | |||
− | |||
− | == | + | == Reaction Formula == |
− | * [[ | + | * With identifiers: |
− | ** [[ | + | ** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[S-ADENOSYLMETHIONINAMINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] |
− | == Pathways | + | * With common name(s): |
− | * [[PWY- | + | ** 1 S-adenosyl-L-methionine[c] '''+''' 1 H+[c] '''=>''' 1 S-adenosyl 3-(methylthio)propylamine[c] '''+''' 1 CO2[c] |
+ | |||
+ | == Genes associated with this reaction == | ||
+ | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * Gene: [[Ec-22_002520]] | ||
+ | ** Source: [[annotation-esiliculosus_genome]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | ** Source: [[orthology-aragem]] | ||
+ | * Gene: [[Ec-27_006890]] | ||
+ | ** Source: [[annotation-esiliculosus_genome]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | ** Source: [[orthology-aragem]] | ||
+ | == Pathways == | ||
+ | * [[BSUBPOLYAMSYN-PWY]], spermidine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=BSUBPOLYAMSYN-PWY BSUBPOLYAMSYN-PWY] | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[ARGSPECAT-PWY]], spermine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=ARGSPECAT-PWY ARGSPECAT-PWY] | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-6834]], spermidine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6834 PWY-6834] | ||
+ | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * Category: [[orthology]] | ||
+ | ** Source: [[orthology-aragem]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | * Category: [[annotation]] | ||
+ | ** Source: [[annotation-esiliculosus_genome]] | ||
+ | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
− | {{#set: common name= | + | * RHEA: |
− | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15981 15981] |
− | {{#set: pathway | + | * LIGAND-RXN: |
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R00178 R00178] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P82184 P82184] | ||
+ | ** [http://www.uniprot.org/uniprot/P21182 P21182] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A7F6 P0A7F6] | ||
+ | ** [http://www.uniprot.org/uniprot/P17707 P17707] | ||
+ | ** [http://www.uniprot.org/uniprot/P28918 P28918] | ||
+ | ** [http://www.uniprot.org/uniprot/P17708 P17708] | ||
+ | ** [http://www.uniprot.org/uniprot/P50243 P50243] | ||
+ | ** [http://www.uniprot.org/uniprot/P46255 P46255] | ||
+ | ** [http://www.uniprot.org/uniprot/Q04694 Q04694] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42679 Q42679] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42829 Q42829] | ||
+ | ** [http://www.uniprot.org/uniprot/P79888 P79888] | ||
+ | ** [http://www.uniprot.org/uniprot/O04009 O04009] | ||
+ | ** [http://www.uniprot.org/uniprot/O24575 O24575] | ||
+ | ** [http://www.uniprot.org/uniprot/Q43820 Q43820] | ||
+ | ** [http://www.uniprot.org/uniprot/Q39676 Q39676] | ||
+ | ** [http://www.uniprot.org/uniprot/Q39677 Q39677] | ||
+ | ** [http://www.uniprot.org/uniprot/O49972 O49972] | ||
+ | ** [http://www.uniprot.org/uniprot/O65354 O65354] | ||
+ | ** [http://www.uniprot.org/uniprot/O02655 O02655] | ||
+ | {{#set: direction=LEFT-TO-RIGHT}} | ||
+ | {{#set: common name=S-adenosylmethionine decarboxylase subgroup}} | ||
+ | {{#set: common name=S-Adenosylmethionine decarboxylase}} | ||
+ | {{#set: ec number=EC-4.1.1.50}} | ||
+ | {{#set: gene associated=Ec-22_002520|Ec-27_006890}} | ||
+ | {{#set: in pathway=BSUBPOLYAMSYN-PWY|ARGSPECAT-PWY|PWY-6834}} | ||
+ | {{#set: reconstruction category=orthology|annotation}} | ||
+ | {{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Revision as of 13:57, 21 March 2018
Contents
Reaction SAMDECARB-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- S-adenosylmethionine decarboxylase subgroup
- S-Adenosylmethionine decarboxylase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 S-ADENOSYLMETHIONINE[c] + 1 PROTON[c] => 1 S-ADENOSYLMETHIONINAMINE[c] + 1 CARBON-DIOXIDE[c]
- With common name(s):
- 1 S-adenosyl-L-methionine[c] + 1 H+[c] => 1 S-adenosyl 3-(methylthio)propylamine[c] + 1 CO2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Ec-22_002520
- Source: annotation-esiliculosus_genome
- Assignment: EC-NUMBER
- Source: orthology-aragem
- Source: annotation-esiliculosus_genome
- Gene: Ec-27_006890
- Source: annotation-esiliculosus_genome
- Assignment: EC-NUMBER
- Source: orthology-aragem
- Source: annotation-esiliculosus_genome
Pathways
- BSUBPOLYAMSYN-PWY, spermidine biosynthesis I: BSUBPOLYAMSYN-PWY
- 2 reactions found over 2 reactions in the full pathway
- ARGSPECAT-PWY, spermine biosynthesis: ARGSPECAT-PWY
- 2 reactions found over 2 reactions in the full pathway
- PWY-6834, spermidine biosynthesis III: PWY-6834
- 1 reactions found over 4 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-aragem
- Tool: pantograph
- Source: orthology-aragem
- Category: annotation
- Source: annotation-esiliculosus_genome
- Tool: pathwaytools
- Source: annotation-esiliculosus_genome
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: