Difference between revisions of "RXN-14047"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8665 RXN-8665] == * direction: ** LEFT-TO-RIGHT * common name: ** Indoleamine 2,3-dioxygenase *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14047 RXN-14047] == * direction: ** REVERSIBLE * common name: ** Aconitate hydratase, ** Aconit...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8665 RXN-8665] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14047 RXN-14047] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Indoleamine 2,3-dioxygenase
+
** Aconitate hydratase,
 +
** Aconitase/3-isopropylmalate dehydratase, swivel
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.13.11.11 EC-1.13.11.11]
+
** [http://enzyme.expasy.org/EC/4.2.1.3 EC-4.2.1.3]
−
** [http://enzyme.expasy.org/EC/1.13.11.52 EC-1.13.11.52]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[TRP]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[N-FORMYLKYNURENINE]][c]
+
** 1 [[CIT]][c] '''<=>''' 1 [[THREO-DS-ISO-CITRATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-tryptophan[c] '''+''' 1 oxygen[c] '''=>''' 1 N-formylkynurenine[c]
+
** 1 citrate[c] '''<=>''' 1 D-threo-isocitrate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-20_001720]]
+
* Gene: [[Ec-16_001000]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-12_000170]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Assignment: AUTOMATED-NAME-MATCH
 
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7765]], 3-hydroxy-4-methyl-anthranilate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7765 PWY-7765]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5651]], L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5651 PWY-5651]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[TRPCAT-PWY]], L-tryptophan degradation I (via anthranilate): [http://metacyc.org/META/NEW-IMAGE?object=TRPCAT-PWY TRPCAT-PWY]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6309]], L-tryptophan degradation XI (mammalian, via kynurenine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6309 PWY-6309]
 
−
** '''8''' reactions found over '''17''' reactions in the full pathway
 
−
* [[PWY-7717]], 3-hydroxy-4-methyl-anthranilate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7717 PWY-7717]
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 37: Line 30:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24536 24536]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00678 R00678]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01324 R01324]
−
* UNIPROT:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.uniprot.org/uniprot/P21643 P21643]
+
{{#set: common name=Aconitate hydratase,}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: common name=Aconitase/3-isopropylmalate dehydratase, swivel}}
−
{{#set: common name=Indoleamine 2,3-dioxygenase}}
+
{{#set: ec number=EC-4.2.1.3}}
−
{{#set: ec number=EC-1.13.11.11}}
+
{{#set: gene associated=Ec-16_001000|Ec-12_000170}}
−
{{#set: ec number=EC-1.13.11.52}}
+
{{#set: in pathway=}}
−
{{#set: gene associated=Ec-20_001720}}
+
−
{{#set: in pathway=PWY-7765|PWY-5651|TRPCAT-PWY|PWY-6309|PWY-7717}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:00, 21 March 2018

Reaction RXN-14047

  • direction:
    • REVERSIBLE
  • common name:
    • Aconitate hydratase,
    • Aconitase/3-isopropylmalate dehydratase, swivel
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 citrate[c] <=> 1 D-threo-isocitrate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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