Difference between revisions of "RXN-17780"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?obje...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17780 RXN-17780] == * direction: ** LEFT-TO-RIGHT * common name: ** enoyl-Coenzyme A hydratase/...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17780 RXN-17780] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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* common name:
 
* common name:
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** tRNA charging
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** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
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** ClpP/crotonase-like domain
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** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
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* ec number:
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** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''21''' reactions found over '''21''' reactions in the full pathway
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* With identifiers:
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* [[ALANINE--TRNA-LIGASE-RXN]]
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** 1 [[CPD-19170]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-19168]][c]
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** 3 associated gene(s):
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* With common name(s):
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*** [[Ec-20_000890]]
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** 1 (2E,7Z)-hexadecenoyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 (S)-3-hydroxy-(7Z)-hexadecenoyl-CoA[c]
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*** [[Ec-07_007070]]
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*** [[Ec-01_006770]]
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== Genes associated with this reaction  ==
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** 1 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-esiliculosus_genome]]
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* Gene: [[Ec-16_003560]]
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* [[ARGININE--TRNA-LIGASE-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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** 2 associated gene(s):
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*** Assignment: EC-NUMBER
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*** [[Ec-01_003640]]
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* Gene: [[Ec-06_001380]]
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*** [[Ec-03_001410]]
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** Source: [[annotation-esiliculosus_genome]]
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** 1 reconstruction source(s) associated:
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*** Assignment: EC-NUMBER
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*** [[annotation-esiliculosus_genome]]
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* Gene: [[Ec-14_006530]]
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* [[ASPARAGINE--TRNA-LIGASE-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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** 1 associated gene(s):
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[Ec-16_001810]]
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* Gene: [[Ec-16_001250]]
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** 1 reconstruction source(s) associated:
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** Source: [[annotation-esiliculosus_genome]]
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*** [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* [[ASPARTATE--TRNA-LIGASE-RXN]]
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== Pathways  ==
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** 2 associated gene(s):
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== Reconstruction information  ==
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*** [[Ec-06_003810]]
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* Category: [[annotation]]
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*** [[Ec-19_005440]]
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** Source: [[annotation-esiliculosus_genome]]
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** 1 reconstruction source(s) associated:
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*** Tool: [[pathwaytools]]
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*** [[annotation-esiliculosus_genome]]
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* [[CYSTEINE--TRNA-LIGASE-RXN]]
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** 3 associated gene(s):
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*** [[Ec-10_004180]]
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*** [[Ec-02_002270]]
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*** [[Ec-12_001440]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[GLURS-RXN]]
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** 1 associated gene(s):
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*** [[Ec-06_008480]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[GLUTAMINE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
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*** [[Ec-10_000780]]
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*** [[Ec-17_003970]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[GLYCINE--TRNA-LIGASE-RXN]]
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** 3 associated gene(s):
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*** [[Ec-07_006780]]
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*** [[Ec-07_006790]]
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*** [[Ec-14_006280]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[HISTIDINE--TRNA-LIGASE-RXN]]
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** 1 associated gene(s):
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*** [[Ec-11_004790]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[ISOLEUCINE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
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*** [[Ec-12_001710]]
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*** [[Ec-06_008740]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[LEUCINE--TRNA-LIGASE-RXN]]
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−
** 2 associated gene(s):
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*** [[Ec-12_001400]]
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*** [[Ec-06_008730]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[LYSINE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
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*** [[Ec-19_000900]]
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*** [[Ec-01_005790]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[METHIONINE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
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*** [[Ec-16_002540]]
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*** [[Ec-18_004570]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[PHENYLALANINE--TRNA-LIGASE-RXN]]
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** 4 associated gene(s):
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*** [[Ec-15_003330]]
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*** [[Ec-06_008260]]
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*** [[Ec-02_005310]]
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*** [[Ec-27_001900]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[PROLINE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
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*** [[Ec-26_002190]]
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*** [[Ec-08_005570]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-16165]]
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** 2 associated gene(s):
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*** [[Ec-16_002540]]
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*** [[Ec-18_004570]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[SERINE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
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*** [[Ec-24_004300]]
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*** [[Ec-08_002360]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[THREONINE--TRNA-LIGASE-RXN]]
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** 1 associated gene(s):
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*** [[Ec-05_005060]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[TRYPTOPHAN--TRNA-LIGASE-RXN]]
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** 1 associated gene(s):
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*** [[Ec-08_005870]]
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** 1 reconstruction source(s) associated:
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−
*** [[annotation-esiliculosus_genome]]
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* [[TYROSINE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
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*** [[Ec-18_001870]]
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*** [[Ec-01_009160]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[VALINE--TRNA-LIGASE-RXN]]
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−
** 2 associated gene(s):
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*** [[Ec-08_004480]]
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*** [[Ec-12_005070]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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* ECOCYC:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
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{{#set: taxonomic range=TAX-2759}}
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{{#set: common name=ClpP/crotonase-like domain}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: ec number=EC-4.2.1.17}}
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{{#set: common name=tRNA charging}}
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{{#set: gene associated=Ec-16_003560|Ec-06_001380|Ec-14_006530|Ec-16_001250}}
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{{#set: reaction found=21}}
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{{#set: in pathway=}}
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{{#set: total reaction=21}}
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{{#set: reconstruction category=annotation}}
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{{#set: completion rate=100.0}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:00, 21 March 2018

Reaction RXN-17780

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
    • ClpP/crotonase-like domain
    • Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (2E,7Z)-hexadecenoyl-CoA[c] + 1 H2O[c] => 1 (S)-3-hydroxy-(7Z)-hexadecenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-17780&oldid=23799"