Difference between revisions of "RXN-11245"

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(Created page with "Category:Gene == Gene Ec-24_002150 == * left end position: ** 2490398 * transcription direction: ** NEGATIVE * right end position: ** 2493686 * centisome position: ** 49.9...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11245 RXN-11245] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-hydroxyacyl-CoA dehydroge...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-24_002150 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11245 RXN-11245] ==
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* left end position:
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* direction:
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** 2490398
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** 3-hydroxyacyl-CoA dehydrogenase
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* right end position:
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** 6-phosphogluconate dehydrogenase, C-terminal-like
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** 2493686
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
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** 49.93107   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0060_0078
 
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** Esi0060_0078
 
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** CYP5164A2
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[RXN-3661]]
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* With identifiers:
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** Source: [[orthology-aragem]]
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** 1 [[NAD]][c] '''+''' 1 [[CPD-12199]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-10600]][c]
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* Reaction: [[RXN-8038]]
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* With common name(s):
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** Source: [[orthology-aragem]]
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** 1 NAD+[c] '''+''' 1 3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA[c] '''=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 4-hydroxybenzoyl-acetyl-CoA[c]
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* Reaction: [[RXN-8040]]
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** Source: [[orthology-aragem]]
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== Genes associated with this reaction  ==
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* Reaction: [[RXN1F-147]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-19_005290]]
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* Reaction: [[RXN1F-148]]
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** Source: [[annotation-esiliculosus_genome]]
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** Source: [[orthology-aragem]]
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*** Assignment: EC-NUMBER
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* Reaction: [[RXN1F-150]]
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* Gene: [[Ec-14_006530]]
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** Source: [[orthology-aragem]]
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** Source: [[annotation-esiliculosus_genome]]
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* Reaction: [[RXN1F-151]]
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*** Assignment: GO-TERM
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* Reaction: [[UNSPECIFIC-MONOOXYGENASE-RXN]]
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* [[PWY-6435]], 4-hydroxybenzoate biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6435 PWY-6435]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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*** Tool: [[pathwaytools]]
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== Pathways associated ==
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* [[PWY-5640]]
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* [[PWY-5946]]
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* [[PWY-5943]]
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* [[PWY-5947]]
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* [[PWY-7591]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=2490398}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=3-hydroxyacyl-CoA dehydrogenase}}
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{{#set: right end position=2493686}}
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{{#set: common name=6-phosphogluconate dehydrogenase, C-terminal-like}}
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{{#set: centisome position=49.93107    }}
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{{#set: ec number=EC-1.1.1.35}}
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{{#set: common name=Esi_0060_0078|Esi0060_0078|CYP5164A2}}
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{{#set: gene associated=Ec-19_005290|Ec-14_006530}}
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{{#set: reaction associated=RXN-3661|RXN-8038|RXN-8040|RXN1F-147|RXN1F-148|RXN1F-150|RXN1F-151|UNSPECIFIC-MONOOXYGENASE-RXN}}
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{{#set: in pathway=PWY-6435}}
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{{#set: pathway associated=PWY-5640|PWY-5946|PWY-5943|PWY-5947|PWY-7591}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:01, 21 March 2018

Reaction RXN-11245

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-hydroxyacyl-CoA dehydrogenase
    • 6-phosphogluconate dehydrogenase, C-terminal-like
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA[c] => 1 NADH[c] + 1 H+[c] + 1 4-hydroxybenzoyl-acetyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6435, 4-hydroxybenzoate biosynthesis V: PWY-6435
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-11245&oldid=23843"