Difference between revisions of "RXN-2542"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.148-RXN 2.7.1.148-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** GHMP kinase N-termi...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2542 RXN-2542] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-methyl-6-phytyl-1,4-benzoqu...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.148-RXN 2.7.1.148-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2542 RXN-2542] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** GHMP kinase N-terminal domain
+
** 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.1.148 EC-2.7.1.148]
+
** [http://enzyme.expasy.org/EC/2.1.1.295 EC-2.1.1.295]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[4-CYTIDINE-5-DIPHOSPHO-2-C]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[2-PHOSPHO-4-CYTIDINE-5-DIPHOSPHO-2-C-MET]][c] '''+''' 1 [[ADP]][c]
+
** 1 [[MPBQ]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[DMPBQ]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol[c] '''+''' 1 ATP[c] '''=>''' 1 H+[c] '''+''' 1 2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol[c] '''+''' 1 ADP[c]
+
** 1 2-methyl-6-phytyl-1,4-benzoquinol[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 2,3-dimethyl-6-phytyl-1,4-benzoquinol[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-10_001370]]
+
* Gene: [[Ec-21_003900]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: GO-TERM
−
** Source: [[orthology-aragem]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
+
* [[PWY-1422]], vitamin E biosynthesis (tocopherols): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1422 PWY-1422]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''7''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560]
+
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-aragem]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18437 18437]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05634 R05634]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07501 R07501]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=GHMP kinase N-terminal domain}}
+
{{#set: common name=2-methyl-6-phytyl-1,4-benzoquinone methyltransferase}}
−
{{#set: ec number=EC-2.7.1.148}}
+
{{#set: ec number=EC-2.1.1.295}}
−
{{#set: gene associated=Ec-10_001370}}
+
{{#set: gene associated=Ec-21_003900}}
−
{{#set: in pathway=NONMEVIPP-PWY|PWY-7560}}
+
{{#set: in pathway=PWY-1422}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:02, 21 March 2018

Reaction RXN-2542

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 2-methyl-6-phytyl-1,4-benzoquinol[c] + 1 S-adenosyl-L-methionine[c] => 1 H+[c] + 1 2,3-dimethyl-6-phytyl-1,4-benzoquinol[c] + 1 S-adenosyl-L-homocysteine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-1422, vitamin E biosynthesis (tocopherols): PWY-1422
    • 7 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-2542&oldid=24008"