Difference between revisions of "RXN-12588"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9549 RXN-9549] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/3....")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12588 RXN-12588] == * direction: ** LEFT-TO-RIGHT * common name: ** Aminotransferase class V do...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9549 RXN-9549] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12588 RXN-12588] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** Aminotransferase class V domain
 +
** Cysteine desulfurase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.2.14 EC-3.1.2.14]
+
** [http://enzyme.expasy.org/EC/2.8.1.7 EC-2.8.1.7]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Palmitoyl-ACPs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[PALMITATE]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[CYS]][c] '''+''' 1 [[Unsulfurated-Sulfur-Acceptors]][c] '''=>''' 1 [[Sulfurated-Sulfur-Acceptors]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a palmitoyl-[acp][c] '''+''' 1 H2O[c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 palmitate[c] '''+''' 1 H+[c]
+
** 1 L-cysteine[c] '''+''' 1 an unsulfurated [sulfur carrier][c] '''=>''' 1 a sulfurated [sulfur carrier][c] '''+''' 1 L-alanine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-22_000950]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-21_003740]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-21_005640]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7746]], mycobacterial sulfolipid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7746 PWY-7746]
 
−
** '''1''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
 
−
** '''28''' reactions found over '''31''' reactions in the full pathway
 
−
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
 
−
** '''20''' reactions found over '''31''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[gap-filling]]
+
* Category: [[annotation]]
−
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
+
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[meneco]]
+
*** Tool: [[pathwaytools]]
−
**** Comment: [[added for gapfilling]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30130 30130]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01706 R01706]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-3.1.2.14}}
+
{{#set: common name=Aminotransferase class V domain}}
−
{{#set: in pathway=PWY-7746|PWY-5971|PWY-5994}}
+
{{#set: common name=Cysteine desulfurase}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: ec number=EC-2.8.1.7}}
−
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: gene associated=Ec-22_000950|Ec-21_003740|Ec-21_005640}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:02, 21 March 2018

Reaction RXN-12588

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Aminotransferase class V domain
    • Cysteine desulfurase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-12588&oldid=24037"