Difference between revisions of "RXN-16094"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIACYLGLYKIN-RXN DIACYLGLYKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** diacylglycero...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16094 RXN-16094] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIACYLGLYKIN-RXN DIACYLGLYKIN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16094 RXN-16094] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** diacylglycerol kinase
 
−
** Diacylglycerol kinase, catalytic domain
 
−
** Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.1.107 EC-2.7.1.107]
+
** [http://enzyme.expasy.org/EC/2.3.1.199 EC-2.3.1.199]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[DIACYLGLYCEROL]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[L-PHOSPHATIDATE]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[CPD-18]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-17346]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a 1,2-diacyl-sn-glycerol[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 H+[c] '''+''' 1 a 1,2-diacyl-sn-glycerol 3-phosphate[c]
+
** 1 H+[c] '''+''' 1 malonyl-CoA[c] '''+''' 1 linoleoyl-CoA[c] '''=>''' 1 coenzyme A[c] '''+''' 1 CO2[c] '''+''' 1 3-oxo-(11Z,14Z)-icosa-11,14-dienoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* Gene: [[Ec-18_000550]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[Ec-18_000560]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[Ec-27_006490]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: GO-TERM
 
−
* Gene: [[Ec-06_002120]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: GO-TERM
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7039]], phosphatidate metabolism, as a signaling molecule: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7039 PWY-7039]
+
* [[PWY-7601]], arachidonate biosynthesis IV (8-detaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7601 PWY-7601]
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7725]], arachidonate biosynthesis V (8-detaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7725 PWY-7725]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6598]], sciadonate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6598 PWY-6598]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[annotation]]
+
* Category: [[gap-filling]]
−
** Source: [[annotation-esiliculosus_genome]]
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
*** Tool: [[pathwaytools]]
+
*** Tool: [[meneco]]
 +
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10272 10272]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02240 R02240]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q01583 Q01583]
 
−
** [http://www.uniprot.org/uniprot/P49621 P49621]
 
−
** [http://www.uniprot.org/uniprot/P49619 P49619]
 
−
** [http://www.uniprot.org/uniprot/P51556 P51556]
 
−
** [http://www.uniprot.org/uniprot/Q9JTJ7 Q9JTJ7]
 
−
** [http://www.uniprot.org/uniprot/Q9CGK9 Q9CGK9]
 
−
** [http://www.uniprot.org/uniprot/Q9PIN8 Q9PIN8]
 
−
** [http://www.uniprot.org/uniprot/O08560 O08560]
 
−
** [http://www.uniprot.org/uniprot/P0ABN1 P0ABN1]
 
−
** [http://www.uniprot.org/uniprot/P20192 P20192]
 
−
** [http://www.uniprot.org/uniprot/P23743 P23743]
 
−
** [http://www.uniprot.org/uniprot/Q06119 Q06119]
 
−
** [http://www.uniprot.org/uniprot/Q03603 Q03603]
 
−
** [http://www.uniprot.org/uniprot/Q39017 Q39017]
 
−
** [http://www.uniprot.org/uniprot/Q09103 Q09103]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=diacylglycerol kinase}}
+
{{#set: ec number=EC-2.3.1.199}}
−
{{#set: common name=Diacylglycerol kinase, catalytic domain}}
+
{{#set: in pathway=PWY-7601|PWY-7725|PWY-6598}}
−
{{#set: common name=Protein kinase C-like, phorbol ester/diacylglycerol-binding domain}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: ec number=EC-2.7.1.107}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: gene associated=Ec-18_000550|Ec-18_000560|Ec-27_006490|Ec-06_002120}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: in pathway=PWY-7039}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 19:03, 21 March 2018

Reaction RXN-16094

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 malonyl-CoA[c] + 1 linoleoyl-CoA[c] => 1 coenzyme A[c] + 1 CO2[c] + 1 3-oxo-(11Z,14Z)-icosa-11,14-dienoyl-CoA[c]

Genes associated with this reaction

Pathways

  • PWY-7601, arachidonate biosynthesis IV (8-detaturase, lower eukaryotes): PWY-7601
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-7725, arachidonate biosynthesis V (8-detaturase, mammals): PWY-7725
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-6598, sciadonate biosynthesis: PWY-6598
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-16094&oldid=24131"