Difference between revisions of "HOLOCYTOCHROME-C-SYNTHASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LYSINE--TRNA-LIGASE-RXN LYSINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOLOCYTOCHROME-C-SYNTHASE-RXN HOLOCYTOCHROME-C-SYNTHASE-RXN] == * direction: ** REVERSIBLE * common...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LYSINE--TRNA-LIGASE-RXN LYSINE--TRNA-LIGASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOLOCYTOCHROME-C-SYNTHASE-RXN HOLOCYTOCHROME-C-SYNTHASE-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Lysyl-tRNA Synthetase
+
** holocytochrome-c synthase
−
** Lysyl-tRNA ligase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.1.1.6 EC-6.1.1.6]
+
** [http://enzyme.expasy.org/EC/4.4.1.17 EC-4.4.1.17]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[LYS]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[LYS-tRNAs]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[Charged-LYS-tRNAs]][c] '''+''' 1 [[AMP]][c]
+
** 1 [[Cytochromes-c]][c] '''<=>''' 1 [[Apocytochromes-c]][c] '''+''' 1 [[HEME_C]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-lysine[c] '''+''' 1 ATP[c] '''+''' 1 H+[c] '''+''' 1 a tRNAlys[c] '''=>''' 1 diphosphate[c] '''+''' 1 an L-lysyl-[tRNAlys][c] '''+''' 1 AMP[c]
+
** 1 a c-type cytochrome[c] '''<=>''' 1 an apo-[c-type cytochrome][c] '''+''' 1 heme c[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-19_000900]]
+
* Gene: [[Ec-10_003030]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: GO-TERM
−
* Gene: [[Ec-01_005790]]
+
* Gene: [[Ec-17_000530]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
−
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
 
−
** '''21''' reactions found over '''21''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 33: Line 30:
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03658 R03658]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02480 R02480]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P41258 P41258]
+
** [http://www.uniprot.org/uniprot/P06182 P06182]
−
** [http://www.uniprot.org/uniprot/P46861 P46861]
+
** [http://www.uniprot.org/uniprot/P14187 P14187]
−
** [http://www.uniprot.org/uniprot/P47382 P47382]
+
** [http://www.uniprot.org/uniprot/O25044 O25044]
−
** [http://www.uniprot.org/uniprot/O57963 O57963]
+
** [http://www.uniprot.org/uniprot/O83139 O83139]
−
** [http://www.uniprot.org/uniprot/O51603 O51603]
+
** [http://www.uniprot.org/uniprot/P45706 P45706]
−
** [http://www.uniprot.org/uniprot/Q9JTT7 Q9JTT7]
+
** [http://www.uniprot.org/uniprot/Q9ZMH0 Q9ZMH0]
−
** [http://www.uniprot.org/uniprot/O83650 O83650]
+
** [http://www.uniprot.org/uniprot/P44202 P44202]
−
** [http://www.uniprot.org/uniprot/Q9X231 Q9X231]
+
** [http://www.uniprot.org/uniprot/P53701 P53701]
−
** [http://www.uniprot.org/uniprot/P43825 P43825]
+
** [http://www.uniprot.org/uniprot/Q00873 Q00873]
−
** [http://www.uniprot.org/uniprot/Q9ZDF8 Q9ZDF8]
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.uniprot.org/uniprot/O84786 O84786]
+
{{#set: common name=holocytochrome-c synthase}}
−
** [http://www.uniprot.org/uniprot/Q9Z6X5 Q9Z6X5]
+
{{#set: ec number=EC-4.4.1.17}}
−
** [http://www.uniprot.org/uniprot/Q9CII7 Q9CII7]
+
{{#set: gene associated=Ec-10_003030|Ec-17_000530}}
−
** [http://www.uniprot.org/uniprot/P56126 P56126]
+
{{#set: in pathway=}}
−
** [http://www.uniprot.org/uniprot/Q9ZMP8 Q9ZMP8]
+
−
** [http://www.uniprot.org/uniprot/O67258 O67258]
+
−
** [http://www.uniprot.org/uniprot/O84002 O84002]
+
−
** [http://www.uniprot.org/uniprot/Q9RHV9 Q9RHV9]
+
−
** [http://www.uniprot.org/uniprot/P32048 P32048]
+
−
** [http://www.uniprot.org/uniprot/P37879 P37879]
+
−
** [http://www.uniprot.org/uniprot/Q48986 Q48986]
+
−
** [http://www.uniprot.org/uniprot/P0A8N7 P0A8N7]
+
−
** [http://www.uniprot.org/uniprot/P37477 P37477]
+
−
** [http://www.uniprot.org/uniprot/P75500 P75500]
+
−
** [http://www.uniprot.org/uniprot/P95970 P95970]
+
−
** [http://www.uniprot.org/uniprot/P73443 P73443]
+
−
** [http://www.uniprot.org/uniprot/P15180 P15180]
+
−
** [http://www.uniprot.org/uniprot/P0A8N3 P0A8N3]
+
−
** [http://www.uniprot.org/uniprot/P0A8N5 P0A8N5]
+
−
** [http://www.uniprot.org/uniprot/Q43776 Q43776]
+
−
** [http://www.uniprot.org/uniprot/O74059 O74059]
+
−
** [http://www.uniprot.org/uniprot/O30522 O30522]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=Lysyl-tRNA Synthetase}}
+
−
{{#set: common name=Lysyl-tRNA ligase}}
+
−
{{#set: ec number=EC-6.1.1.6}}
+
−
{{#set: gene associated=Ec-19_000900|Ec-01_005790}}
+
−
{{#set: in pathway=TRNA-CHARGING-PWY}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:03, 21 March 2018

Reaction HOLOCYTOCHROME-C-SYNTHASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • holocytochrome-c synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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