Difference between revisions of "Ec-20 001390"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5285 RXN-5285] == * direction: ** LEFT-TO-RIGHT * common name: ** Protochlorophyllide reductase...")
(Created page with "Category:Gene == Gene Ec-20_001390 == * left end position: ** 1375237 * transcription direction: ** NEGATIVE * right end position: ** 1396875 * centisome position: ** 26.6...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5285 RXN-5285] ==
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== Gene Ec-20_001390 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1375237
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* common name:
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* transcription direction:
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** Protochlorophyllide reductase, putative chloroplast precursor
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.3.1.33 EC-1.3.1.33]
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** 1396875
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* centisome position:
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** 26.670378   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0023_0001
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** Esi0023_0001
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** BCAT4
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[DIVINYL-PROTOCHLOROPHYLLIDE-A]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[DIVINYLCHLOROPHYLLIDE-A]][c] '''+''' 1 [[NADP]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 H+[c] '''+''' 1 3,8-divinyl protochlorophyllide a[c] '''+''' 1 NADPH[c] '''=>''' 1 3,8-divinyl chlorophyllide a[c] '''+''' 1 NADP+[c]
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* Reaction: [[BRANCHED-CHAINAMINOTRANSFERLEU-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-20_003900]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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*** Assignment: go-term
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== Pathways  ==
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* Reaction: [[BRANCHED-CHAINAMINOTRANSFERVAL-RXN]]
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* [[CHLOROPHYLL-SYN]], 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): [http://metacyc.org/META/NEW-IMAGE?object=CHLOROPHYLL-SYN CHLOROPHYLL-SYN]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY-5076]]
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* [[ILEUSYN-PWY]]
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* [[ILEUDEG-PWY]]
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* [[LEU-DEG2-PWY]]
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* [[VALDEG-PWY]]
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* [[PWY-5057]]
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* [[VALSYN-PWY]]
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* [[PWY-7767]]
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* [[PWY-5108]]
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* [[LEUSYN-PWY]]
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* [[PWY-5103]]
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* [[PWY-5101]]
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* [[PWY-5078]]
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* [[ALANINE-VALINESYN-PWY]]
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* [[PWY-5104]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=1375237}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06286 R06286]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=1396875}}
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{{#set: common name=Protochlorophyllide reductase, putative chloroplast precursor}}
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{{#set: centisome position=26.670378    }}
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{{#set: ec number=EC-1.3.1.33}}
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{{#set: common name=Esi_0023_0001|Esi0023_0001|BCAT4}}
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{{#set: gene associated=Ec-20_003900}}
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{{#set: reaction associated=BRANCHED-CHAINAMINOTRANSFERILEU-RXN|BRANCHED-CHAINAMINOTRANSFERLEU-RXN|BRANCHED-CHAINAMINOTRANSFERVAL-RXN}}
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{{#set: in pathway=CHLOROPHYLL-SYN}}
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{{#set: pathway associated=PWY-5076|ILEUSYN-PWY|ILEUDEG-PWY|LEU-DEG2-PWY|VALDEG-PWY|PWY-5057|VALSYN-PWY|PWY-7767|PWY-5108|LEUSYN-PWY|PWY-5103|PWY-5101|PWY-5078|ALANINE-VALINESYN-PWY|PWY-5104}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:04, 21 March 2018

Gene Ec-20_001390

  • left end position:
    • 1375237
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 1396875
  • centisome position:
    • 26.670378
  • Synonym(s):
    • Esi_0023_0001
    • Esi0023_0001
    • BCAT4

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-20_001390&oldid=24354"