Difference between revisions of "SsRNAs"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CDPKIN-RXN CDPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** nucleoside diphosphate ki...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=ssRNAs ssRNAs] == * common name: ** a single-stranded RNA * Synonym(s): ** a ssRNA == Reaction...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CDPKIN-RXN CDPKIN-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=ssRNAs ssRNAs] ==
* direction:
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** LEFT-TO-RIGHT
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* common name:
 
* common name:
** nucleoside diphosphate kinase
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** a single-stranded RNA
** Nucleoside diphosphate kinase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
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* Synonym(s):
 
* Synonym(s):
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** a ssRNA
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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== Reaction(s) known to produce the compound ==
** 1 [[ATP]][c] '''+''' 1 [[CDP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CTP]][c]
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== Reaction(s) of unknown directionality ==
* With common name(s):
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* [[2.7.7.8-RXN]]
** 1 ATP[c] '''+''' 1 CDP[c] '''=>''' 1 ADP[c] '''+''' 1 CTP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-26_003930]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-11_005170]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-03_001380]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-22_003280]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-07_000140]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-04_001140]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-11_004330]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[PWY-7205]], CMP phosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7205 PWY-7205]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: common name=a single-stranded RNA}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25237 25237]
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{{#set: common name=a ssRNA}}
* LIGAND-RXN:
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{{#set: reversible reaction associated=2.7.7.8-RXN}}
** [http://www.genome.jp/dbget-bin/www_bget?R00570 R00570]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=nucleoside diphosphate kinase}}
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{{#set: common name=Nucleoside diphosphate kinase}}
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{{#set: ec number=EC-2.7.4.6}}
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{{#set: gene associated=Ec-26_003930|Ec-11_005170|Ec-03_001380|Ec-22_003280|Ec-07_000140|Ec-04_001140|Ec-11_004330}}
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{{#set: in pathway=PWY-7205}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:06, 21 March 2018

Metabolite ssRNAs

  • common name:
    • a single-stranded RNA
  • Synonym(s):
    • a ssRNA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links