Difference between revisions of "RXN-1404"

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(Created page with "Category:Gene == Gene Ec-07_001420 == * left end position: ** 1604131 * transcription direction: ** POSITIVE * right end position: ** 1618731 * centisome position: ** 20.7...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1404 RXN-1404] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/3....")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-07_001420 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1404 RXN-1404] ==
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* left end position:
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* direction:
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** 1604131
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** POSITIVE
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** [http://enzyme.expasy.org/EC/3.5.5.1 EC-3.5.5.1]
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* right end position:
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** 1618731
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* centisome position:
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** 20.77236   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0045_0115
 
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** Esi0045_0115
 
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** CAT
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[CATAL-RXN]]
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* With identifiers:
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** Source: [[annotation-esiliculosus_genome]]
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** 1 [[INDOLEYL-CPD]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[INDOLE_ACETATE_AUXIN]][c]
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*** Assignment: ec-number
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* With common name(s):
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** 1 indole-3-acetonitrile[c] '''+''' 2 H2O[c] '''=>''' 1 ammonium[c] '''+''' 1 indole-3-acetate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-01_002370]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-26_000350]]
 
** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
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* Reaction: [[RXN-14189]]
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== Pathways  ==
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY-581]], indole-3-acetate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-581 PWY-581]
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*** Assignment: ec-number
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** '''2''' reactions found over '''14''' reactions in the full pathway
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* [[PWY-5026]], indole-3-acetate biosynthesis V (bacteria and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5026 PWY-5026]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWYQT-4476]], indole glucosinolate breakdown (insect chewing induced): [http://metacyc.org/META/NEW-IMAGE?object=PWYQT-4476 PWYQT-4476]
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** '''1''' reactions found over '''14''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
 
** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
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* Reaction: [[RXN66-1]]
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*** Tool: [[pantograph]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-5506]]
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* [[DETOX1-PWY-1]]
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* [[DETOX1-PWY]]
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* [[PWY66-162]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=1604131}}
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* LIGAND-RXN:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03093 R03093]
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{{#set: right end position=1618731}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=20.77236    }}
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{{#set: ec number=EC-3.5.5.1}}
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{{#set: common name=Esi_0045_0115|Esi0045_0115|CAT}}
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{{#set: gene associated=Ec-01_002370|Ec-26_000350}}
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{{#set: reaction associated=CATAL-RXN|RXN-14189|RXN66-1}}
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{{#set: in pathway=PWY-581|PWY-5026|PWYQT-4476}}
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{{#set: pathway associated=PWY-5506|DETOX1-PWY-1|DETOX1-PWY|PWY66-162}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:06, 21 March 2018

Reaction RXN-1404

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-581, indole-3-acetate biosynthesis II: PWY-581
    • 2 reactions found over 14 reactions in the full pathway
  • PWY-5026, indole-3-acetate biosynthesis V (bacteria and fungi): PWY-5026
    • 1 reactions found over 1 reactions in the full pathway
  • PWYQT-4476, indole glucosinolate breakdown (insect chewing induced): PWYQT-4476
    • 1 reactions found over 14 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-1404&oldid=24599"