Difference between revisions of "Ec-13 001660"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1861 PWY-1861] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Gene == Gene Ec-13_001660 == * left end position: ** 2732486 * transcription direction: ** POSITIVE * right end position: ** 2735481 * centisome position: ** 39.3...")
 
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1861 PWY-1861] ==
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== Gene Ec-13_001660 ==
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* taxonomic range:
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* left end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** 2732486
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* common name:
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* transcription direction:
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** formaldehyde assimilation II (RuMP Cycle)
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** POSITIVE
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* right end position:
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** 2735481
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* centisome position:
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** 39.394188   
 
* Synonym(s):
 
* Synonym(s):
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** ribulose monophosphate cycle
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** Esi_0375_0021
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** formaldehyde assimilation
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** Esi0375_0021
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** RuMP pathway
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== Reaction(s) found ==
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== Reactions associated ==
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'''7''' reactions found over '''9''' reactions in the full pathway
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* Reaction: [[3.2.1.25-RXN]]
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* [[1TRANSKETO-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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** 1 associated gene(s):
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*** Assignment: go-term
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*** [[Ec-20_002600]]
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== Pathways associated ==
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[2TRANSKETO-RXN]]
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** 1 associated gene(s):
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*** [[Ec-20_002600]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[6PFRUCTPHOS-RXN]]
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** 3 associated gene(s):
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*** [[Ec-14_003880]]
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*** [[Ec-22_000070]]
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*** [[Ec-12_002540]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[F16ALDOLASE-RXN]]
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** 4 associated gene(s):
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*** [[Ec-10_004980]]
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*** [[Ec-01_008040]]
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*** [[Ec-10_000880]]
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*** [[Ec-14_001680]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RIB5PISOM-RXN]]
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** 1 associated gene(s):
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*** [[Ec-08_003540]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[RIBULP3EPIM-RXN]]
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** 2 associated gene(s):
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*** [[Ec-07_002390]]
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*** [[Ec-27_003930]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[TRANSALDOL-RXN]]
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** 2 associated gene(s):
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*** [[Ec-06_003940]]
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*** [[Ec-01_002780]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=R10-RXN R10-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R12-RXN R12-RXN]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2}}
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{{#set: left end position=2732486}}
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{{#set: common name=formaldehyde assimilation II (RuMP Cycle)}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=ribulose monophosphate cycle|formaldehyde assimilation|RuMP pathway}}
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{{#set: right end position=2735481}}
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{{#set: reaction found=7}}
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{{#set: centisome position=39.394188    }}
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{{#set: total reaction=9}}
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{{#set: common name=Esi_0375_0021|Esi0375_0021}}
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{{#set: completion rate=78.0}}
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{{#set: reaction associated=3.2.1.25-RXN}}

Latest revision as of 20:07, 21 March 2018

Gene Ec-13_001660

  • left end position:
    • 2732486
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2735481
  • centisome position:
    • 39.394188
  • Synonym(s):
    • Esi_0375_0021
    • Esi0375_0021

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-13_001660&oldid=24669"