Difference between revisions of "RXN-15830"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5905 PWY-5905] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15830 RXN-15830] == * direction: ** LEFT-TO-RIGHT * common name: ** cytochrome-c oxidase * ec n...")
 
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5905 PWY-5905] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15830 RXN-15830] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** hypusine biosynthesis
+
** cytochrome-c oxidase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.9.3.1 EC-1.9.3.1]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''5''' reactions found over '''5''' reactions in the full pathway
+
* With identifiers:
−
* [[DEOXYHYPUSINE-MONOOXYGENASE-RXN]]
+
** 8 [[PROTON]][c] '''+''' 4 [[Cytochromes-C-Reduced]][e] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 4 [[Cytochromes-C-Oxidized]][e] '''+''' 4 [[PROTON]][e] '''+''' 2 [[WATER]][c]
−
** 0 associated gene:
+
* With common name(s):
−
** 1 reconstruction source(s) associated:
+
** 8 H+[c] '''+''' 4 a reduced c-type cytochrome[e] '''+''' 1 oxygen[c] '''=>''' 4 an oxidized c-type cytochrome[e] '''+''' 4 H+[e] '''+''' 2 H2O[c]
−
*** [[annotation-esiliculosus_genome]]
+
 
−
* [[RXN-13414]]
+
== Genes associated with this reaction  ==
−
** 1 associated gene(s):
+
Genes have been associated with this reaction based on different elements listed below.
−
*** [[Ec-27_002000]]
+
* Gene: [[Ec-01_001120]]
−
** 1 reconstruction source(s) associated:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[annotation-esiliculosus_genome]]
+
*** Assignment: GO-TERM
−
* [[RXN-13415]]
+
* Gene: [[Ec-07_006760]]
−
** 1 associated gene(s):
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[Ec-27_002000]]
+
*** Assignment: GO-TERM
−
** 1 reconstruction source(s) associated:
+
* Gene: [[Ec-21_005020]]
−
*** [[annotation-esiliculosus_genome]]
+
** Source: [[annotation-esiliculosus_genome]]
−
* [[RXN-13416]]
+
*** Assignment: GO-TERM
−
** 1 associated gene(s):
+
== Pathways  ==
−
*** [[Ec-27_002000]]
+
* [[PWY-6692]], Fe(II) oxidation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6692 PWY-6692]
−
** 1 reconstruction source(s) associated:
+
** '''3''' reactions found over '''6''' reactions in the full pathway
−
*** [[annotation-esiliculosus_genome]]
+
== Reconstruction information  ==
−
* [[RXN-13417]]
+
* Category: [[annotation]]
−
** 1 associated gene(s):
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[Ec-27_002000]]
+
*** Tool: [[pathwaytools]]
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
== Reaction(s) not found ==
+
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-2759}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=hypusine biosynthesis}}
+
{{#set: common name=cytochrome-c oxidase}}
−
{{#set: reaction found=5}}
+
{{#set: ec number=EC-1.9.3.1}}
−
{{#set: total reaction=5}}
+
{{#set: gene associated=Ec-01_001120|Ec-07_006760|Ec-21_005020}}
−
{{#set: completion rate=100.0}}
+
{{#set: in pathway=PWY-6692}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:08, 21 March 2018

Reaction RXN-15830

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • cytochrome-c oxidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6692, Fe(II) oxidation: PWY-6692
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-15830&oldid=24856"