Difference between revisions of "Ec-07 003640"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10780 RXN-10780] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Gene == Gene Ec-07_003640 == * left end position: ** 3705268 * transcription direction: ** NEGATIVE * right end position: ** 3708474 * centisome position: ** 47.9...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10780 RXN-10780] ==
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== Gene Ec-07_003640 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3705268
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.2.1.3 EC-1.2.1.3]
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** NEGATIVE
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* right end position:
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** 3708474
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* centisome position:
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** 47.9806   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0046_0105
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** Esi0046_0105
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[DNA-DIRECTED-RNA-POLYMERASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[5-HYDROXYINDOLE_ACETALDEHYDE]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[5-HYDROXYINDOLE_ACETATE]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[NADH]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 H2O[c] '''+''' 1 5-hydroxyindole acetaldehyde[c] '''+''' 1 NAD+[c] '''=>''' 1 5-hydroxyindole acetate[c] '''+''' 2 H+[c] '''+''' 1 NADH[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-11_002450]]
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** Source: [[orthology-aragem]]
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== Pathways ==
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* [[PWY-6313]], serotonin degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6313 PWY-6313]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=3705268}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31215 31215]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=3708474}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04903 R04903]
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{{#set: centisome position=47.9806    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0046_0105|Esi0046_0105}}
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{{#set: ec number=EC-1.2.1.3}}
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{{#set: reaction associated=DNA-DIRECTED-RNA-POLYMERASE-RXN}}
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{{#set: gene associated=Ec-11_002450}}
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{{#set: in pathway=PWY-6313}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:11, 21 March 2018

Gene Ec-07_003640

  • left end position:
    • 3705268
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3708474
  • centisome position:
    • 47.9806
  • Synonym(s):
    • Esi_0046_0105
    • Esi0046_0105

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-07_003640&oldid=25125"