Difference between revisions of "Ec-24 003890"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALANINE-AMINOTRANSFERASE-RXN ALANINE-AMINOTRANSFERASE-RXN] == * direction: ** REVERSIBLE * common n...")
(Created page with "Category:Gene == Gene Ec-24_003890 == * left end position: ** 4268388 * transcription direction: ** NEGATIVE * right end position: ** 4274871 * centisome position: ** 85.5...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALANINE-AMINOTRANSFERASE-RXN ALANINE-AMINOTRANSFERASE-RXN] ==
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== Gene Ec-24_003890 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 4268388
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* common name:
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* transcription direction:
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** Glutamate:glyoxylate aminotransferase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.6.1.2 EC-2.6.1.2]
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** 4274871
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* centisome position:
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** 85.578766   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0109_0087
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** Esi0109_0087
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[LYSOPHOSPHOLIPASE-RXN]]
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** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c] '''<=>''' 1 [[PYRUVATE]][c] '''+''' 1 [[GLT]][c]
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* With common name(s):
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** 1 2-oxoglutarate[c] '''+''' 1 L-alanine[c] '''<=>''' 1 pyruvate[c] '''+''' 1 L-glutamate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-01_011040]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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*** Assignment: automated-name-match
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-15035]]
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[ALANINE-DEG3-PWY]], L-alanine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=ALANINE-DEG3-PWY ALANINE-DEG3-PWY]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-7383]], anaerobic energy metabolism (invertebrates, cytosol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7383 PWY-7383]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
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** '''9''' reactions found over '''10''' reactions in the full pathway
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* [[ALACAT2-PWY]], L-alanine degradation II (to D-lactate): [http://metacyc.org/META/NEW-IMAGE?object=ALACAT2-PWY ALACAT2-PWY]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7115 PWY-7115]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[ALANINE-SYN2-PWY]], L-alanine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=ALANINE-SYN2-PWY ALANINE-SYN2-PWY]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-7409]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=4268388}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19453 19453]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=4274871}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00258 R00258]
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{{#set: centisome position=85.578766    }}
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* UNIPROT:
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{{#set: common name=Esi_0109_0087|Esi0109_0087}}
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** [http://www.uniprot.org/uniprot/P13191 P13191]
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{{#set: reaction associated=LYSOPHOSPHOLIPASE-RXN|RXN-15035}}
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** [http://www.uniprot.org/uniprot/P25409 P25409]
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{{#set: pathway associated=PWY-7409}}
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** [http://www.uniprot.org/uniprot/P24298 P24298]
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** [http://www.uniprot.org/uniprot/Q9UR81 Q9UR81]
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** [http://www.uniprot.org/uniprot/P34106 P34106]
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** [http://www.uniprot.org/uniprot/P52894 P52894]
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** [http://www.uniprot.org/uniprot/Q42685 Q42685]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Glutamate:glyoxylate aminotransferase}}
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{{#set: ec number=EC-2.6.1.2}}
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{{#set: gene associated=Ec-01_011040}}
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{{#set: in pathway=ALANINE-DEG3-PWY|PWY-7383|PWY-7117|ALACAT2-PWY|PWY-7115|ALANINE-SYN2-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:11, 21 March 2018

Gene Ec-24_003890

  • left end position:
    • 4268388
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4274871
  • centisome position:
    • 85.578766
  • Synonym(s):
    • Esi_0109_0087
    • Esi0109_0087

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-24_003890&oldid=25156"