Difference between revisions of "Ec-26 004170"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-113 RXN-113] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1.14...")
(Created page with "Category:Gene == Gene Ec-26_004170 == * left end position: ** 4400253 * transcription direction: ** POSITIVE * right end position: ** 4411255 * centisome position: ** 66.8...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-113 RXN-113] ==
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== Gene Ec-26_004170 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4400253
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.14.11 EC-1.14.11]
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** POSITIVE
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* right end position:
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** 4411255
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* centisome position:
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** 66.839134   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0349_0012
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** Esi0349_0012
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PEPDEPHOS-RXN]]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD1F-140]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-236]][c] '''+''' 1 [[SUC]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 oxygen[c] '''+''' 1 gibberellin A20[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 CO2[c] '''+''' 1 gibberellin A29[c] '''+''' 1 succinate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-19_002760]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-19_002750]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-08_003510]]
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** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
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== Pathways  ==
 
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* [[PWY-102]], gibberellin inactivation I (2β-hydroxylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-102 PWY-102]
 
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** '''4''' reactions found over '''11''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* Category: [[orthology]]
 
 
** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Reaction: [[RXN-14117]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN-14192]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN-14207]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY-1042]]
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* [[P341-PWY]]
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* [[PWY-2221]]
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* [[GLYCOLYSIS]]
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* [[NPGLUCAT-PWY]]
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* [[PWY-7218]]
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* [[PWY-7383]]
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* [[P124-PWY]]
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* [[PWY-6886]]
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* [[PWY-5723]]
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* [[FERMENTATION-PWY]]
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* [[ANAGLYCOLYSIS-PWY]]
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* [[PWY-5484]]
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* [[PWY-6901]]
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* [[PWY-6142]]
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* [[P122-PWY]]
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* [[PWY-7003]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=4400253}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03809 R03809]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=4411255}}
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{{#set: ec number=EC-1.14.11}}
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{{#set: centisome position=66.839134    }}
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{{#set: gene associated=Ec-19_002760|Ec-19_002750|Ec-08_003510}}
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{{#set: common name=Esi_0349_0012|Esi0349_0012}}
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{{#set: in pathway=PWY-102}}
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{{#set: reaction associated=PEPDEPHOS-RXN|RXN-14117|RXN-14192|RXN-14207}}
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{{#set: reconstruction category=orthology}}
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{{#set: pathway associated=PWY-1042|P341-PWY|PWY-2221|GLYCOLYSIS|NPGLUCAT-PWY|PWY-7218|PWY-7383|P124-PWY|PWY-6886|PWY-5723|FERMENTATION-PWY|ANAGLYCOLYSIS-PWY|PWY-5484|PWY-6901|PWY-6142|P122-PWY|PWY-7003}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:11, 21 March 2018

Gene Ec-26_004170

  • left end position:
    • 4400253
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4411255
  • centisome position:
    • 66.839134
  • Synonym(s):
    • Esi_0349_0012
    • Esi0349_0012

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-26_004170&oldid=25195"