Difference between revisions of "PWY-7238"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOXYKIN-RXN PEPCARBOXYKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phosphoenol...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7238 PWY-7238] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOXYKIN-RXN PEPCARBOXYKIN-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7238 PWY-7238] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
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** phosphoenolpyruvate carboxykinase (ATP)
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** sucrose biosynthesis II
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* ec number:
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** [http://enzyme.expasy.org/EC/4.1.1.49 EC-4.1.1.49]
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* Synonym(s):
 
* Synonym(s):
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** sucrose biosynthesis II (from starch degradation intermediates)
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** sucrose biosynthesis II (plant cytosol)
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''8''' reactions in the full pathway
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** 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* [[GLUC1PURIDYLTRANS-RXN]]
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* With common name(s):
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** 4 associated gene(s):
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** 1 oxaloacetate[c] '''+''' 1 ATP[c] '''=>''' 1 phosphoenolpyruvate[c] '''+''' 1 ADP[c] '''+''' 1 CO2[c]
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*** [[Ec-03_002030]]
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*** [[Ec-12_002300]]
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== Genes associated with this reaction  ==
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*** [[Ec-16_004100]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Ec-05_002180]]
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* Gene: [[Ec-19_002930]]
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** 2 reconstruction source(s) associated:
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** Source: [[annotation-esiliculosus_genome]]
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*** [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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*** [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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* [[GLUCOKIN-RXN]]
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== Pathways  ==
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** 1 associated gene(s):
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* [[PWY-561]], superpathway of glyoxylate cycle and fatty acid degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-561 PWY-561]
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*** [[Ec-27_005030]]
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** '''6''' reactions found over '''8''' reactions in the full pathway
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** 1 reconstruction source(s) associated:
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* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
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*** [[annotation-esiliculosus_genome]]
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** '''13''' reactions found over '''13''' reactions in the full pathway
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* [[PGLUCISOM-RXN]]
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* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
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** 3 associated gene(s):
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** '''9''' reactions found over '''10''' reactions in the full pathway
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*** [[Ec-24_002470]]
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== Reconstruction information  ==
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*** [[Ec-13_003530]]
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* Category: [[orthology]]
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*** [[Ec-13_003810]]
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** Source: [[orthology-aragem]]
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** 1 reconstruction source(s) associated:
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*** Tool: [[pantograph]]
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*** [[annotation-esiliculosus_genome]]
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* Category: [[annotation]]
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* [[PHOSPHOGLUCMUT-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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** 1 associated gene(s):
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*** Tool: [[pathwaytools]]
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*** [[Ec-17_001480]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14353 RXN-14353]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14354 RXN-14354]
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* [http://metacyc.org/META/NEW-IMAGE?object=SUCROSE-PHOSPHATASE-RXN SUCROSE-PHOSPHATASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=SUCROSE-PHOSPHATE-SYNTHASE-RXN SUCROSE-PHOSPHATE-SYNTHASE-RXN]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18617 18617]
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{{#set: common name=sucrose biosynthesis II}}
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* LIGAND-RXN:
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{{#set: common name=sucrose biosynthesis II (from starch degradation intermediates)|sucrose biosynthesis II (plant cytosol)}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00341 R00341]
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{{#set: reaction found=4}}
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* UNIPROT:
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{{#set: total reaction=8}}
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** [http://www.uniprot.org/uniprot/P10963 P10963]
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{{#set: completion rate=50.0}}
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** [http://www.uniprot.org/uniprot/Q9PP01 Q9PP01]
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** [http://www.uniprot.org/uniprot/P43923 P43923]
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** [http://www.uniprot.org/uniprot/P22259 P22259]
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** [http://www.uniprot.org/uniprot/P42066 P42066]
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** [http://www.uniprot.org/uniprot/P49292 P49292]
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** [http://www.uniprot.org/uniprot/O49547 O49547]
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** [http://www.uniprot.org/uniprot/Q9T074 Q9T074]
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** [http://www.uniprot.org/uniprot/Q39294 Q39294]
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** [http://www.uniprot.org/uniprot/Q9RC49 Q9RC49]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=phosphoenolpyruvate carboxykinase (ATP)}}
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{{#set: ec number=EC-4.1.1.49}}
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{{#set: gene associated=Ec-19_002930}}
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{{#set: in pathway=PWY-561|GLUCONEO-PWY|PWY-7117}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:12, 21 March 2018

Pathway PWY-7238

  • taxonomic range:
  • common name:
    • sucrose biosynthesis II
  • Synonym(s):
    • sucrose biosynthesis II (from starch degradation intermediates)
    • sucrose biosynthesis II (plant cytosol)

Reaction(s) found

4 reactions found over 8 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-7238&oldid=25329"