Difference between revisions of "HOMOSERDEHYDROG-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6857 PWY-6857] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOSERDEHYDROG-RXN HOMOSERDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ACT dom...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6857 PWY-6857] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOSERDEHYDROG-RXN HOMOSERDEHYDROG-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** retinol biosynthesis
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** ACT domain
 +
** Homoserine dehydrogenase
 +
** aspartate kinase/homoserine dehydrogenase
 +
* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.3 EC-1.1.1.3]
 
* Synonym(s):
 
* Synonym(s):
−
** vitamin A biosynthesis
 
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** retinal biosynthesis
 
−
** retinoid biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''7''' reactions in the full pathway
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* With identifiers:
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* [[RXN-12575]]
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** 1 [[L-ASPARTATE-SEMIALDEHYDE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''=>''' 1 [[HOMO-SER]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
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** 5 associated gene(s):
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* With common name(s):
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*** [[Ec-27_004830]]
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** 1 L-aspartate-semialdehyde[c] '''+''' 1 H+[c] '''+''' 1 NAD(P)H[c] '''=>''' 1 L-homoserine[c] '''+''' 1 NAD(P)+[c]
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*** [[Ec-19_001900]]
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*** [[Ec-12_006850]]
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== Genes associated with this reaction  ==
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*** [[Ec-16_002070]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Ec-25_000250]]
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* Gene: [[Ec-11_000830]]
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** 1 reconstruction source(s) associated:
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** Source: [[annotation-esiliculosus_genome]]
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*** [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[RXN-12579]]
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* Gene: [[Ec-11_004120]]
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** 19 associated gene(s):
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-06_005070]]
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*** Assignment: EC-NUMBER
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*** [[Ec-24_003610]]
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* Gene: [[Ec-01_005000]]
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*** [[Ec-15_000190]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-15_000020]]
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*** Assignment: EC-NUMBER
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*** [[Ec-16_003710]]
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== Pathways  ==
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*** [[Ec-15_000240]]
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* [[HOMOSERSYN-PWY]], L-homoserine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSERSYN-PWY HOMOSERSYN-PWY]
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*** [[Ec-23_002330]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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*** [[Ec-23_002340]]
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== Reconstruction information  ==
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*** [[Ec-15_000230]]
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* Category: [[annotation]]
−
*** [[Ec-02_001660]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-06_003310]]
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*** Tool: [[pathwaytools]]
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*** [[Ec-06_004240]]
+
−
*** [[Ec-15_000160]]
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−
*** [[Ec-11_001230]]
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−
*** [[Ec-16_000950]]
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−
*** [[Ec-21_004100]]
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−
*** [[Ec-11_004280]]
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−
*** [[Ec-23_002290]]
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−
*** [[Ec-27_003400]]
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−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
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−
== Reaction(s) not found ==
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−
* [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.135-RXN 2.3.1.135-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10841 RXN-10841]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12548 RXN-12548]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12549 RXN-12549]
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−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13374 RXN-13374]
+
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-33208}}
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* LIGAND-RXN:
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{{#set: common name=retinol biosynthesis}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01773 R01773]
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{{#set: common name=vitamin A biosynthesis|retinal biosynthesis|retinoid biosynthesis}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01775 R01775]
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{{#set: reaction found=2}}
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* UNIPROT:
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{{#set: total reaction=7}}
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** [http://www.uniprot.org/uniprot/P44505 P44505]
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{{#set: completion rate=29.0}}
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** [http://www.uniprot.org/uniprot/Q58997 Q58997]
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** [http://www.uniprot.org/uniprot/P27725 P27725]
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** [http://www.uniprot.org/uniprot/O67677 O67677]
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** [http://www.uniprot.org/uniprot/P19582 P19582]
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** [http://www.uniprot.org/uniprot/P00561 P00561]
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** [http://www.uniprot.org/uniprot/P00562 P00562]
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** [http://www.uniprot.org/uniprot/P08499 P08499]
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** [http://www.uniprot.org/uniprot/Q9JR84 Q9JR84]
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** [http://www.uniprot.org/uniprot/Q9PIX8 Q9PIX8]
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** [http://www.uniprot.org/uniprot/P56429 P56429]
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** [http://www.uniprot.org/uniprot/O27300 O27300]
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** [http://www.uniprot.org/uniprot/Q9CGD8 Q9CGD8]
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** [http://www.uniprot.org/uniprot/P52985 P52985]
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** [http://www.uniprot.org/uniprot/P31116 P31116]
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** [http://www.uniprot.org/uniprot/P37142 P37142]
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** [http://www.uniprot.org/uniprot/Q9SA18 Q9SA18]
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** [http://www.uniprot.org/uniprot/P52986 P52986]
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** [http://www.uniprot.org/uniprot/P49079 P49079]
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** [http://www.uniprot.org/uniprot/P49080 P49080]
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** [http://www.uniprot.org/uniprot/P93402 P93402]
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** [http://www.uniprot.org/uniprot/O81852 O81852]
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** [http://www.uniprot.org/uniprot/O63067 O63067]
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** [http://www.uniprot.org/uniprot/O65027 O65027]
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** [http://www.uniprot.org/uniprot/P46806 P46806]
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{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=ACT domain}}
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{{#set: common name=Homoserine dehydrogenase}}
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{{#set: common name=aspartate kinase/homoserine dehydrogenase}}
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{{#set: ec number=EC-1.1.1.3}}
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{{#set: gene associated=Ec-11_000830|Ec-11_004120|Ec-01_005000}}
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{{#set: in pathway=HOMOSERSYN-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:14, 21 March 2018

Reaction HOMOSERDEHYDROG-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ACT domain
    • Homoserine dehydrogenase
    • aspartate kinase/homoserine dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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