Difference between revisions of "GMP-SYN-NH3-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GMP-SYN-NH3-RXN GMP-SYN-NH3-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** GMP synthase (g...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GMP-SYN-NH3-RXN GMP-SYN-NH3-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
 
* common name:
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** pyrimidine deoxyribonucleotides de novo biosynthesis I
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** GMP synthase (glutamine-hydrolyzing)
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''9''' reactions found over '''9''' reactions in the full pathway
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* With identifiers:
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* [[CDPREDUCT-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[GMP]][c]
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** 7 associated gene(s):
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* With common name(s):
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*** [[Ec-19_000440]]
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** 1 ATP[c] '''+''' 1 ammonium[c] '''+''' 1 XMP[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 2 H+[c] '''+''' 1 GMP[c]
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*** [[Ec-06_005120]]
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*** [[Ec-06_005570]]
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== Genes associated with this reaction  ==
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*** [[Ec-21_002920]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Ec-17_003700]]
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* Gene: [[Ec-13_002710]]
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*** [[Ec-11_002170]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-11_002180]]
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*** Assignment: EC-NUMBER
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** 2 reconstruction source(s) associated:
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** Source: [[orthology-aragem]]
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*** [[annotation-esiliculosus_genome]]
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== Pathways  ==
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*** [[orthology-aragem]]
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== Reconstruction information  ==
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* [[DCDPKIN-RXN]]
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* Category: [[orthology]]
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** 7 associated gene(s):
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** Source: [[orthology-aragem]]
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*** [[Ec-03_001380]]
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*** Tool: [[pantograph]]
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*** [[Ec-11_005170]]
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* Category: [[annotation]]
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*** [[Ec-26_003930]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-22_003280]]
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*** Tool: [[pathwaytools]]
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*** [[Ec-07_000140]]
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*** [[Ec-04_001140]]
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*** [[Ec-11_004330]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[DTDPKIN-RXN]]
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** 7 associated gene(s):
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*** [[Ec-26_003930]]
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*** [[Ec-07_000140]]
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*** [[Ec-03_001380]]
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*** [[Ec-22_003280]]
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*** [[Ec-04_001140]]
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*** [[Ec-11_004330]]
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*** [[Ec-11_005170]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[DTMPKI-RXN]]
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** 1 associated gene(s):
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*** [[Ec-20_004950]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[DUDPKIN-RXN]]
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** 7 associated gene(s):
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*** [[Ec-22_003280]]
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*** [[Ec-04_001140]]
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*** [[Ec-07_000140]]
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*** [[Ec-26_003930]]
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*** [[Ec-03_001380]]
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*** [[Ec-11_005170]]
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*** [[Ec-11_004330]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[DUTP-PYROP-RXN]]
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** 1 associated gene(s):
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*** [[Ec-13_002810]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[RXN-12195]]
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** 9 associated gene(s):
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*** [[Ec-05_005340]]
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*** [[Ec-03_004860]]
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*** [[Ec-02_005730]]
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*** [[Ec-17_000870]]
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*** [[Ec-18_004660]]
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*** [[Ec-28_000420]]
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*** [[Ec-03_001180]]
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*** [[Ec-01_003690]]
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*** [[Ec-06_005470]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[THYMIDYLATESYN-RXN]]
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** 1 associated gene(s):
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*** [[Ec-27_004630]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[UDPREDUCT-RXN]]
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** 7 associated gene(s):
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*** [[Ec-06_005120]]
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*** [[Ec-21_002920]]
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*** [[Ec-06_005570]]
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*** [[Ec-11_002180]]
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*** [[Ec-17_003700]]
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*** [[Ec-11_002170]]
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*** [[Ec-19_000440]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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* ECOCYC:
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* RHEA:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-7184 PWY-7184]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18301 18301]
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{{#set: taxonomic range=TAX-2157}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2759}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01230 R01230]
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{{#set: taxonomic range=TAX-2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=pyrimidine deoxyribonucleotides de novo biosynthesis I}}
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{{#set: common name=GMP synthase (glutamine-hydrolyzing)}}
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{{#set: reaction found=9}}
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{{#set: gene associated=Ec-13_002710}}
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{{#set: total reaction=9}}
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{{#set: in pathway=}}
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{{#set: completion rate=100.0}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:15, 21 March 2018

Reaction GMP-SYN-NH3-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • GMP synthase (glutamine-hydrolyzing)
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=GMP-SYN-NH3-RXN&oldid=25644"