Difference between revisions of "Ec-11 005000"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRATE-REDUCTASE-NADPH-RXN NITRATE-REDUCTASE-NADPH-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
(Created page with "Category:Gene == Gene Ec-11_005000 == * left end position: ** 5024441 * transcription direction: ** NEGATIVE * right end position: ** 5028060 * centisome position: ** 79.8...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRATE-REDUCTASE-NADPH-RXN NITRATE-REDUCTASE-NADPH-RXN] ==
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== Gene Ec-11_005000 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5024441
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* common name:
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* transcription direction:
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** NAD(P)H-Nitrate reductase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.7.1.3 EC-1.7.1.3]
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** 5028060
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* centisome position:
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** 79.88417   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0071_0065
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** Esi0071_0065
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** HMT
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[NITRATE]][c] '''=>''' 1 [[NITRITE]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
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* With common name(s):
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** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 nitrate[c] '''=>''' 1 nitrite[c] '''+''' 1 NADP+[c] '''+''' 1 H2O[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-10_005740]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** Assignment: go-term
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== Pathways  ==
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** Source: [[orthology-aragem]]
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* [[PWY-5675]], nitrate reduction V (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5675 PWY-5675]
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* Reaction: [[MMUM-RXN]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[ADENOSYLHOMOCYSCAT-PWY]]
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* [[PWY-702]]
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* [[PWY-5441]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=5024441}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19061 19061]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=5028060}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00796 R00796]
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{{#set: centisome position=79.88417    }}
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* UNIPROT:
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{{#set: common name=Esi_0071_0065|Esi0071_0065|HMT}}
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** [http://www.uniprot.org/uniprot/Q12561 Q12561]
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{{#set: reaction associated=HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN|MMUM-RXN}}
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** [http://www.uniprot.org/uniprot/P22945 P22945]
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{{#set: pathway associated=ADENOSYLHOMOCYSCAT-PWY|PWY-702|PWY-5441}}
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** [http://www.uniprot.org/uniprot/P39863 P39863]
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** [http://www.uniprot.org/uniprot/Q05531 Q05531]
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** [http://www.uniprot.org/uniprot/P36858 P36858]
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** [http://www.uniprot.org/uniprot/P36842 P36842]
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** [http://www.uniprot.org/uniprot/P39864 P39864]
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** [http://www.uniprot.org/uniprot/Q01696 Q01696]
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** [http://www.uniprot.org/uniprot/Q00284 Q00284]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=NAD(P)H-Nitrate reductase}}
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{{#set: ec number=EC-1.7.1.3}}
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{{#set: gene associated=Ec-10_005740}}
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{{#set: in pathway=PWY-5675}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:16, 21 March 2018

Gene Ec-11_005000

  • left end position:
    • 5024441
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 5028060
  • centisome position:
    • 79.88417
  • Synonym(s):
    • Esi_0071_0065
    • Esi0071_0065
    • HMT

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-11_005000&oldid=25722"