Difference between revisions of "RXN1G-499"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2PGADEHYDRAT-RXN 2PGADEHYDRAT-RXN] == * direction: ** REVERSIBLE * common name: ** phosphopyruvate...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-499 RXN1G-499] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-lignoceroyl-[acyl-car...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2PGADEHYDRAT-RXN 2PGADEHYDRAT-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-499 RXN1G-499] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** phosphopyruvate hydratase
+
** 3-oxo-lignoceroyl-[acyl-carrier protein] synthase
−
** Enolase
+
** Beta-ketoacyl synthase, N-terminal
 +
** beta-ketoacyl synthase, partial
 +
** Thiolase-like, subgroup
 +
** 3-oxoacyl-[acyl-carrier-protein] synthase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.2.1.11 EC-4.2.1.11]
+
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[2-PG]][c] '''<=>''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[WATER]][c]
+
** 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Behenoyl-ACPs]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[3-oxo-lignoceroyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 2-phospho-D-glycerate[c] '''<=>''' 1 phosphoenolpyruvate[c] '''+''' 1 H2O[c]
+
** 1 malonyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 a behenoyl-[acp][c] '''=>''' 1 coenzyme A[c] '''+''' 1 a 3-oxo-lignoceroyl-[acp][c] '''+''' 1 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-14_005400]]
+
* Gene: [[Ec-27_003480]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: GO-TERM
+
*** Assignment: EC-NUMBER
−
** Source: [[orthology-aragem]]
+
* Gene: [[Ec-12_000640]]
−
** Source: [[orthology-aragem]]
+
** Source: [[annotation-esiliculosus_genome]]
−
* Gene: [[Ec-27_004000]]
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-12_000650]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[Ec-26_004120]]
+
* Gene: [[Ec-27_002090]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-aragem]]
 
−
** Source: [[orthology-aragem]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-1042]], glycolysis IV (plant cytosol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1042 PWY-1042]
+
* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
−
** '''8''' reactions found over '''10''' reactions in the full pathway
+
** '''30''' reactions found over '''182''' reactions in the full pathway
−
* [[P341-PWY]], glycolysis V (Pyrococcus): [http://metacyc.org/META/NEW-IMAGE?object=P341-PWY P341-PWY]
+
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-2221]], Entner-Doudoroff pathway III (semi-phosphorylative): [http://metacyc.org/META/NEW-IMAGE?object=PWY-2221 PWY-2221]
+
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-1622]], formaldehyde assimilation I (serine pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1622 PWY-1622]
+
−
** '''6''' reactions found over '''13''' reactions in the full pathway
+
−
* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
+
−
** '''13''' reactions found over '''13''' reactions in the full pathway
+
−
* [[PWY-7003]], glycerol degradation to butanol: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7003 PWY-7003]
+
−
** '''8''' reactions found over '''10''' reactions in the full pathway
+
−
* [[PWY-6901]], superpathway of glucose and xylose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6901 PWY-6901]
+
−
** '''9''' reactions found over '''12''' reactions in the full pathway
+
−
* [[PWY-7218]], photosynthetic 3-hydroxybutanoate biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7218 PWY-7218]
+
−
** '''7''' reactions found over '''10''' reactions in the full pathway
+
−
* [[NPGLUCAT-PWY]], Entner-Doudoroff pathway II (non-phosphorylative): [http://metacyc.org/META/NEW-IMAGE?object=NPGLUCAT-PWY NPGLUCAT-PWY]
+
−
** '''4''' reactions found over '''9''' reactions in the full pathway
+
−
* [[P124-PWY]], Bifidobacterium shunt: [http://metacyc.org/META/NEW-IMAGE?object=P124-PWY P124-PWY]
+
−
** '''12''' reactions found over '''15''' reactions in the full pathway
+
−
* [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS GLYCOLYSIS]
+
−
** '''12''' reactions found over '''12''' reactions in the full pathway
+
−
* [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose): [http://metacyc.org/META/NEW-IMAGE?object=ANAGLYCOLYSIS-PWY ANAGLYCOLYSIS-PWY]
+
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
−
* [[PWY-5723]], Rubisco shunt: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723]
+
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
−
* [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6142 PWY-6142]
+
−
** '''10''' reactions found over '''14''' reactions in the full pathway
+
−
* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
+
−
** '''13''' reactions found over '''18''' reactions in the full pathway
+
−
* [[PWY-7124]], ethylene biosynthesis V (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7124 PWY-7124]
+
−
** '''8''' reactions found over '''10''' reactions in the full pathway
+
−
* [[PWY-6886]], 1-butanol autotrophic biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6886 PWY-6886]
+
−
** '''8''' reactions found over '''11''' reactions in the full pathway
+
−
* [[PWY-5484]], glycolysis II (from fructose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5484 PWY-5484]
+
−
** '''11''' reactions found over '''11''' reactions in the full pathway
+
−
* [[PWY66-399]], gluconeogenesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399]
+
−
** '''10''' reactions found over '''12''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-aragem]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10164 10164]
+
{{#set: common name=3-oxo-lignoceroyl-[acyl-carrier protein] synthase}}
−
* LIGAND-RXN:
+
{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00658 R00658]
+
{{#set: common name=beta-ketoacyl synthase, partial}}
−
* UNIPROT:
+
{{#set: common name=Thiolase-like, subgroup}}
−
** [http://www.uniprot.org/uniprot/P04764 P04764]
+
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
−
** [http://www.uniprot.org/uniprot/P07322 P07322]
+
{{#set: ec number=EC-2.3.1.41}}
−
** [http://www.uniprot.org/uniprot/P07323 P07323]
+
{{#set: gene associated=Ec-27_003480|Ec-12_000640|Ec-12_000650|Ec-27_002090}}
−
** [http://www.uniprot.org/uniprot/P06733 P06733]
+
{{#set: in pathway=PWYG-321}}
−
** [http://www.uniprot.org/uniprot/P19140 P19140]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/P25704 P25704]
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
** [http://www.uniprot.org/uniprot/P30575 P30575]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P33675 P33675]
+
−
** [http://www.uniprot.org/uniprot/P47647 P47647]
+
−
** [http://www.uniprot.org/uniprot/Q9JU46 Q9JU46]
+
−
** [http://www.uniprot.org/uniprot/P37869 P37869]
+
−
** [http://www.uniprot.org/uniprot/Q9URB2 Q9URB2]
+
−
** [http://www.uniprot.org/uniprot/Q9CIT0 Q9CIT0]
+
−
** [http://www.uniprot.org/uniprot/Q9CHS7 Q9CHS7]
+
−
** [http://www.uniprot.org/uniprot/P43806 P43806]
+
−
** [http://www.uniprot.org/uniprot/P42448 P42448]
+
−
** [http://www.uniprot.org/uniprot/P42848 P42848]
+
−
** [http://www.uniprot.org/uniprot/Q05524 Q05524]
+
−
** [http://www.uniprot.org/uniprot/P42897 P42897]
+
−
** [http://www.uniprot.org/uniprot/P40370 P40370]
+
−
** [http://www.uniprot.org/uniprot/P51913 P51913]
+
−
** [http://www.uniprot.org/uniprot/P26300 P26300]
+
−
** [http://www.uniprot.org/uniprot/Q42887 Q42887]
+
−
** [http://www.uniprot.org/uniprot/P25696 P25696]
+
−
** [http://www.uniprot.org/uniprot/P00924 P00924]
+
−
** [http://www.uniprot.org/uniprot/P00925 P00925]
+
−
** [http://www.uniprot.org/uniprot/P0A6P9 P0A6P9]
+
−
** [http://www.uniprot.org/uniprot/P29201 P29201]
+
−
** [http://www.uniprot.org/uniprot/P09104 P09104]
+
−
** [http://www.uniprot.org/uniprot/P21550 P21550]
+
−
** [http://www.uniprot.org/uniprot/P08734 P08734]
+
−
** [http://www.uniprot.org/uniprot/Q7M4Y6 Q7M4Y6]
+
−
** [http://www.uniprot.org/uniprot/P15429 P15429]
+
−
** [http://www.uniprot.org/uniprot/P13929 P13929]
+
−
** [http://www.uniprot.org/uniprot/P15007 P15007]
+
−
** [http://www.uniprot.org/uniprot/P17182 P17182]
+
−
** [http://www.uniprot.org/uniprot/P17183 P17183]
+
−
** [http://www.uniprot.org/uniprot/P26301 P26301]
+
−
** [http://www.uniprot.org/uniprot/P31683 P31683]
+
−
** [http://www.uniprot.org/uniprot/Q54274 Q54274]
+
−
** [http://www.uniprot.org/uniprot/P42896 P42896]
+
−
** [http://www.uniprot.org/uniprot/Q27727 Q27727]
+
−
** [http://www.uniprot.org/uniprot/Q9UWJ5 Q9UWJ5]
+
−
** [http://www.uniprot.org/uniprot/P48285 P48285]
+
−
** [http://www.uniprot.org/uniprot/Q12007 Q12007]
+
−
** [http://www.uniprot.org/uniprot/P42222 P42222]
+
−
** [http://www.uniprot.org/uniprot/P75189 P75189]
+
−
** [http://www.uniprot.org/uniprot/P77972 P77972]
+
−
** [http://www.uniprot.org/uniprot/Q49059 Q49059]
+
−
** [http://www.uniprot.org/uniprot/P42895 P42895]
+
−
** [http://www.uniprot.org/uniprot/Q42971 Q42971]
+
−
** [http://www.uniprot.org/uniprot/Q43130 Q43130]
+
−
** [http://www.uniprot.org/uniprot/O69174 O69174]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=phosphopyruvate hydratase}}
+
−
{{#set: common name=Enolase}}
+
−
{{#set: ec number=EC-4.2.1.11}}
+
−
{{#set: gene associated=Ec-14_005400|Ec-27_004000|Ec-26_004120}}
+
−
{{#set: in pathway=PWY-1042|P341-PWY|PWY-2221|PWY-1622|GLUCONEO-PWY|PWY-7003|PWY-6901|PWY-7218|NPGLUCAT-PWY|P124-PWY|GLYCOLYSIS|ANAGLYCOLYSIS-PWY|PWY-5723|PWY-6142|P122-PWY|PWY-7124|PWY-6886|PWY-5484|PWY66-399}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:17, 21 March 2018

Reaction RXN1G-499

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-oxo-lignoceroyl-[acyl-carrier protein] synthase
    • Beta-ketoacyl synthase, N-terminal
    • beta-ketoacyl synthase, partial
    • Thiolase-like, subgroup
    • 3-oxoacyl-[acyl-carrier-protein] synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWYG-321, mycolate biosynthesis: PWYG-321
    • 30 reactions found over 182 reactions in the full pathway

Reconstruction information

External links

"3-oxo-lignoceroyl-[acyl-carrier protein] synthase" cannot be used as a page name in this wiki.


"3-oxoacyl-[acyl-carrier-protein] synthase" cannot be used as a page name in this wiki.




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