Difference between revisions of "RXN-17788"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=SUCSYN-PWY SUCSYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TA...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17788 RXN-17788] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-CoA dehydrogenase ** A...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=SUCSYN-PWY SUCSYN-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17788 RXN-17788] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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* common name:
 
* common name:
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** sucrose biosynthesis I (from photosynthesis)
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** acyl-CoA dehydrogenase
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** Acyl-CoA dehydrogenase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.3.8 EC-1.3.8]
 
* Synonym(s):
 
* Synonym(s):
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** sucrose biosynthesis I (from Calvin cycle intermediates)
 
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** sucrose biosynthesis I
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''6''' reactions found over '''9''' reactions in the full pathway
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* With identifiers:
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* [[F16ALDOLASE-RXN]]
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** 1 [[CPD-10269]][c] '''+''' 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-19162]][c] '''+''' 1 [[ETF-Reduced]][c]
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** 4 associated gene(s):
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* With common name(s):
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*** [[Ec-10_004980]]
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** 1 palmitoleoyl-CoA[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 H+[c] '''=>''' 1 (2E,9Z)-hexadecenoyl-CoA[c] '''+''' 1 a reduced electron-transfer flavoprotein[c]
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*** [[Ec-01_008040]]
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*** [[Ec-10_000880]]
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== Genes associated with this reaction  ==
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*** [[Ec-14_001680]]
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Genes have been associated with this reaction based on different elements listed below.
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** 1 reconstruction source(s) associated:
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* Gene: [[Ec-03_003490]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[F16BDEPHOS-RXN]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** 7 associated gene(s):
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* Gene: [[Ec-14_001600]]
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*** [[Ec-06_004200]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-04_004710]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[Ec-17_003090]]
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* Gene: [[Ec-16_004260]]
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*** [[Ec-12_004070]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-14_005760]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[Ec-22_000360]]
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== Pathways  ==
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*** [[Ec-21_001790]]
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== Reconstruction information  ==
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** 2 reconstruction source(s) associated:
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* Category: [[annotation]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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*** Tool: [[pathwaytools]]
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* [[GAPOXNPHOSPHN-RXN]]
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** 4 associated gene(s):
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*** [[Ec-25_003550]]
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*** [[Ec-19_001850]]
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*** [[Ec-19_003020]]
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*** [[Ec-08_000500]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[PGLUCISOM-RXN]]
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** 3 associated gene(s):
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*** [[Ec-24_002470]]
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*** [[Ec-13_003530]]
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*** [[Ec-13_003810]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[PHOSGLYPHOS-RXN]]
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** 6 associated gene(s):
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*** [[Ec-12_004530]]
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*** [[Ec-21_005710]]
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*** [[Ec-21_004220]]
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*** [[Ec-08_002400]]
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*** [[Ec-12_004550]]
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*** [[Ec-01_001350]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[PWY-7343]]
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** 0 associated gene:
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=SUCROSE-PHOSPHATASE-RXN SUCROSE-PHOSPHATASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=SUCROSE-PHOSPHATE-SYNTHASE-RXN SUCROSE-PHOSPHATE-SYNTHASE-RXN]
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== External links  ==
 
== External links  ==
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* PLANTCYC : SUCSYN-PWY
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{{#set: direction=LEFT-TO-RIGHT}}
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* METACYC:
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{{#set: common name=acyl-CoA dehydrogenase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=SUCSYN-PWY SUCSYN-PWY]
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{{#set: common name=Acyl-CoA dehydrogenase}}
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* ARACYC:
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{{#set: ec number=EC-1.3.8}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=SUCSYN-PWY SUCSYN-PWY]
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{{#set: gene associated=Ec-03_003490|Ec-14_001600|Ec-16_004260}}
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{{#set: taxonomic range=TAX-1117}}
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{{#set: in pathway=}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=sucrose biosynthesis I (from photosynthesis)}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: common name=sucrose biosynthesis I (from Calvin cycle intermediates)|sucrose biosynthesis I}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reaction found=6}}
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{{#set: total reaction=9}}
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{{#set: completion rate=67.0}}
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Latest revision as of 19:18, 21 March 2018

Reaction RXN-17788

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acyl-CoA dehydrogenase
    • Acyl-CoA dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 palmitoleoyl-CoA[c] + 1 an oxidized electron-transfer flavoprotein[c] + 1 H+[c] => 1 (2E,9Z)-hexadecenoyl-CoA[c] + 1 a reduced electron-transfer flavoprotein[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-17788&oldid=25952"