Difference between revisions of "SHIKIMATE-KINASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1321 RXN-1321] == * direction: ** LEFT-TO-RIGHT * common name: ** Lipoxygenase * ec number: **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SHIKIMATE-KINASE-RXN SHIKIMATE-KINASE-RXN] == * direction: ** REVERSIBLE * common name: ** P-loop c...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1321 RXN-1321] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SHIKIMATE-KINASE-RXN SHIKIMATE-KINASE-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Lipoxygenase
+
** P-loop containing nucleoside triphosphate hydrolase
 +
** shikimate kinase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.13.11.12 EC-1.13.11.12]
+
** [http://enzyme.expasy.org/EC/2.7.1.71 EC-2.7.1.71]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[LINOLENIC_ACID]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-725]][c]
+
** 1 [[SHIKIMATE]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SHIKIMATE-5P]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 &alpha;-linolenate[c] '''+''' 1 oxygen[c] '''=>''' 1 13(S)-HPOTE[c]
+
** 1 shikimate[c] '''+''' 1 ATP[c] '''<=>''' 1 ADP[c] '''+''' 1 H+[c] '''+''' 1 shikimate 3-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-03_000010]]
+
* Gene: [[Ec-02_005600]]
−
** Source: [[orthology-aragem]]
+
−
* Gene: [[Ec-03_000020]]
+
−
** Source: [[orthology-aragem]]
+
−
* Gene: [[Ec-20_003620]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
 
** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
−
* Gene: [[Ec-20_003630]]
+
* Gene: [[Ec-11_000770]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: AUTOMATED-NAME-MATCH
+
*** Assignment: GO-TERM
−
** Source: [[orthology-aragem]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5410]], traumatin and (Z)-3-hexen-1-yl acetate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5410 PWY-5410]
+
* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163]
−
** '''1''' reactions found over '''9''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
+
−
** '''10''' reactions found over '''19''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
Line 43: Line 37:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34495 34495]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13121 13121]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R07869 R07869]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02412 R02412]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* UNIPROT:
−
{{#set: common name=Lipoxygenase}}
+
** [http://www.uniprot.org/uniprot/P0A6D7 P0A6D7]
−
{{#set: ec number=EC-1.13.11.12}}
+
** [http://www.uniprot.org/uniprot/Q9PIB5 Q9PIB5]
−
{{#set: gene associated=Ec-03_000010|Ec-03_000020|Ec-20_003620|Ec-20_003630}}
+
** [http://www.uniprot.org/uniprot/P07547 P07547]
−
{{#set: in pathway=PWY-5410|PWY-735}}
+
** [http://www.uniprot.org/uniprot/P08566 P08566]
 +
** [http://www.uniprot.org/uniprot/P43880 P43880]
 +
** [http://www.uniprot.org/uniprot/P63600 P63600]
 +
** [http://www.uniprot.org/uniprot/Q9CEU1 Q9CEU1]
 +
** [http://www.uniprot.org/uniprot/P37944 P37944]
 +
** [http://www.uniprot.org/uniprot/P0A6E1 P0A6E1]
 +
** [http://www.uniprot.org/uniprot/P10880 P10880]
 +
** [http://www.uniprot.org/uniprot/Q00497 Q00497]
 +
** [http://www.uniprot.org/uniprot/P34003 P34003]
 +
** [http://www.uniprot.org/uniprot/P43906 P43906]
 +
** [http://www.uniprot.org/uniprot/P72796 P72796]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=P-loop containing nucleoside triphosphate hydrolase}}
 +
{{#set: common name=shikimate kinase}}
 +
{{#set: ec number=EC-2.7.1.71}}
 +
{{#set: gene associated=Ec-02_005600|Ec-11_000770}}
 +
{{#set: in pathway=PWY-6163}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:20, 21 March 2018

Reaction SHIKIMATE-KINASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • P-loop containing nucleoside triphosphate hydrolase
    • shikimate kinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 shikimate[c] + 1 ATP[c] <=> 1 ADP[c] + 1 H+[c] + 1 shikimate 3-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6163, chorismate biosynthesis from 3-dehydroquinate: PWY-6163
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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