Difference between revisions of "3.4.21.4-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7511 PWY-7511] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.21.4-RXN 3.4.21.4-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Trypsin domain protei...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7511 PWY-7511] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.21.4-RXN 3.4.21.4-RXN] ==
−
* taxonomic range:
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* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** protein ubiquitylation
+
** Trypsin domain protein
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.4.21.4 EC-3.4.21.4]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
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== Reaction Formula ==
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'''9''' reactions found over '''9''' reactions in the full pathway
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* With identifiers:
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* [[RXN-15556]]
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** 1 [[WATER]][c] '''+''' 1 [[General-Protein-Substrates]][c] '''=>''' 1 [[Peptides-holder]][c]
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** 14 associated gene(s):
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* With common name(s):
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*** [[Ec-13_002970]]
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** 1 H2O[c] '''+''' 1 a protein[c] '''=>''' 1 a peptide[c]
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*** [[Ec-14_005080]]
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*** [[Ec-10_003200]]
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== Genes associated with this reaction  ==
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*** [[Ec-08_003600]]
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Genes have been associated with this reaction based on different elements listed below.
−
*** [[Ec-08_005090]]
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* Gene: [[Ec-09_000200]]
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*** [[Ec-28_000490]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-26_004480]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[Ec-12_005810]]
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== Pathways  ==
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*** [[Ec-08_005320]]
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== Reconstruction information  ==
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*** [[Ec-09_003260]]
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* Category: [[annotation]]
−
*** [[Ec-00_001460]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-09_004750]]
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*** Tool: [[pathwaytools]]
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*** [[Ec-08_002220]]
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−
*** [[Ec-16_005210]]
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** 1 reconstruction source(s) associated:
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−
*** [[annotation-esiliculosus_genome]]
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−
* [[RXN-15559]]
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−
** 0 associated gene:
+
−
** 1 reconstruction source(s) associated:
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−
*** [[annotation-esiliculosus_genome]]
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−
* [[RXN-15560]]
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−
** 0 associated gene:
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
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−
* [[RXN-15561]]
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−
** 0 associated gene:
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
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−
* [[RXN-15563]]
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−
** 0 associated gene:
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
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−
* [[RXN-15564]]
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−
** 0 associated gene:
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
* [[RXN-16313]]
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−
** 0 associated gene:
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
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−
* [[RXN-16314]]
+
−
** 0 associated gene:
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
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−
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
+
−
** 25 associated gene(s):
+
−
*** [[Ec-09_004750]]
+
−
*** [[Ec-13_002660]]
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−
*** [[Ec-01_007490]]
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−
*** [[Ec-26_001140]]
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−
*** [[Ec-22_002200]]
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−
*** [[Ec-01_008900]]
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−
*** [[Ec-01_009550]]
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−
*** [[Ec-06_002450]]
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−
*** [[Ec-25_000510]]
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−
*** [[Ec-25_002490]]
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−
*** [[Ec-18_001830]]
+
−
*** [[Ec-01_001660]]
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−
*** [[Ec-14_006720]]
+
−
*** [[Ec-25_000920]]
+
−
*** [[Ec-14_003730]]
+
−
*** [[Ec-00_007160]]
+
−
*** [[Ec-25_000910]]
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−
*** [[Ec-09_000720]]
+
−
*** [[Ec-14_001990]]
+
−
*** [[Ec-25_002630]]
+
−
*** [[Ec-27_002840]]
+
−
*** [[Ec-01_010570]]
+
−
*** [[Ec-16_001360]]
+
−
*** [[Ec-24_003940]]
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−
*** [[Ec-12_000320]]
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−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
== Reaction(s) not found ==
+
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-2759}}
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* UNIPROT:
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{{#set: common name=protein ubiquitylation}}
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** [http://www.uniprot.org/uniprot/P07477 P07477]
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{{#set: reaction found=9}}
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** [http://www.uniprot.org/uniprot/P08426 P08426]
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{{#set: total reaction=9}}
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** [http://www.uniprot.org/uniprot/P35051 P35051]
−
{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/P19799 P19799]
 +
** [http://www.uniprot.org/uniprot/Q7M434 Q7M434]
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** [http://www.uniprot.org/uniprot/Q7M435 Q7M435]
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** [http://www.uniprot.org/uniprot/Q7M390 Q7M390]
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** [http://www.uniprot.org/uniprot/Q7LZP8 Q7LZP8]
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** [http://www.uniprot.org/uniprot/Q7LZF8 Q7LZF8]
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** [http://www.uniprot.org/uniprot/Q7M433 Q7M433]
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** [http://www.uniprot.org/uniprot/P07146 P07146]
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** [http://www.uniprot.org/uniprot/P07478 P07478]
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** [http://www.uniprot.org/uniprot/Q7M3N1 Q7M3N1]
 +
** [http://www.uniprot.org/uniprot/Q7M432 Q7M432]
 +
** [http://www.uniprot.org/uniprot/P32821 P32821]
 +
** [http://www.uniprot.org/uniprot/P32822 P32822]
 +
** [http://www.uniprot.org/uniprot/P12788 P12788]
 +
** [http://www.uniprot.org/uniprot/P35050 P35050]
 +
** [http://www.uniprot.org/uniprot/Q29463 Q29463]
 +
** [http://www.uniprot.org/uniprot/P35034 P35034]
 +
** [http://www.uniprot.org/uniprot/P35031 P35031]
 +
** [http://www.uniprot.org/uniprot/P35032 P35032]
 +
** [http://www.uniprot.org/uniprot/P35033 P35033]
 +
** [http://www.uniprot.org/uniprot/P35030 P35030]
 +
** [http://www.uniprot.org/uniprot/P35035 P35035]
 +
** [http://www.uniprot.org/uniprot/P35036 P35036]
 +
** [http://www.uniprot.org/uniprot/P16049 P16049]
 +
** [http://www.uniprot.org/uniprot/Q91041 Q91041]
 +
** [http://www.uniprot.org/uniprot/P35038 P35038]
 +
** [http://www.uniprot.org/uniprot/P35041 P35041]
 +
** [http://www.uniprot.org/uniprot/P35037 P35037]
 +
** [http://www.uniprot.org/uniprot/Q92099 Q92099]
 +
** [http://www.uniprot.org/uniprot/Q27761 Q27761]
 +
** [http://www.uniprot.org/uniprot/Q90629 Q90629]
 +
** [http://www.uniprot.org/uniprot/Q90628 Q90628]
 +
** [http://www.uniprot.org/uniprot/Q90627 Q90627]
 +
** [http://www.uniprot.org/uniprot/Q7M436 Q7M436]
 +
** [http://www.uniprot.org/uniprot/P35045 P35045]
 +
** [http://www.uniprot.org/uniprot/P00765 P00765]
 +
** [http://www.uniprot.org/uniprot/P00764 P00764]
 +
** [http://www.uniprot.org/uniprot/P06872 P06872]
 +
** [http://www.uniprot.org/uniprot/P06871 P06871]
 +
** [http://www.uniprot.org/uniprot/P00761 P00761]
 +
** [http://www.uniprot.org/uniprot/P00762 P00762]
 +
** [http://www.uniprot.org/uniprot/P00763 P00763]
 +
** [http://www.uniprot.org/uniprot/P00775 P00775]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Trypsin domain protein}}
 +
{{#set: ec number=EC-3.4.21.4}}
 +
{{#set: gene associated=Ec-09_000200}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:20, 21 March 2018

Reaction 3.4.21.4-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Trypsin domain protein
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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