Difference between revisions of "PWY-7380"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=XYLULOKIN-RXN XYLULOKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** xylulose kinase * e...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7380 PWY-7380] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-12...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=XYLULOKIN-RXN XYLULOKIN-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7380 PWY-7380] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
 
* common name:
 
* common name:
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** xylulose kinase
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** biotin biosynthesis from 8-amino-7-oxononanoate II
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.1.17 EC-2.7.1.17]
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* Synonym(s):
 
* Synonym(s):
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** biotin biosynthesis from 7-keto-8-aminopelargonate II
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''3''' reactions in the full pathway
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** 1 [[ATP]][c] '''+''' 1 [[D-XYLULOSE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[XYLULOSE-5-PHOSPHATE]][c] '''+''' 1 [[ADP]][c]
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* [[2.8.1.6-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 ATP[c] '''+''' 1 D-xylulose[c] '''=>''' 1 H+[c] '''+''' 1 D-xylulose 5-phosphate[c] '''+''' 1 ADP[c]
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*** [[Ec-24_000980]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[DETHIOBIOTIN-SYN-RXN]]
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* Gene: [[Ec-01_002810]]
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** 1 associated gene(s):
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-01_005750]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** 1 reconstruction source(s) associated:
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** Source: [[orthology-aragem]]
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*** [[annotation-esiliculosus_genome]]
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== Pathways  ==
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== Reaction(s) not found ==
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* [[DARABITOLUTIL-PWY]], D-arabitol degradation: [http://metacyc.org/META/NEW-IMAGE?object=DARABITOLUTIL-PWY DARABITOLUTIL-PWY]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14930 RXN-14930]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[LARABITOLUTIL-PWY]], xylitol degradation: [http://metacyc.org/META/NEW-IMAGE?object=LARABITOLUTIL-PWY LARABITOLUTIL-PWY]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[XYLCAT-PWY]], xylose degradation I: [http://metacyc.org/META/NEW-IMAGE?object=XYLCAT-PWY XYLCAT-PWY]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-1239}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10964 10964]
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{{#set: common name=biotin biosynthesis from 8-amino-7-oxononanoate II}}
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* LIGAND-RXN:
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{{#set: common name=biotin biosynthesis from 7-keto-8-aminopelargonate II}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01639 R01639]
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{{#set: reaction found=2}}
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* UNIPROT:
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{{#set: total reaction=3}}
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** [http://www.uniprot.org/uniprot/P27156 P27156]
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{{#set: completion rate=67.0}}
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** [http://www.uniprot.org/uniprot/Q9CFG8 Q9CFG8]
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** [http://www.uniprot.org/uniprot/P35850 P35850]
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** [http://www.uniprot.org/uniprot/P09099 P09099]
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** [http://www.uniprot.org/uniprot/P12867 P12867]
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** [http://www.uniprot.org/uniprot/P27155 P27155]
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** [http://www.uniprot.org/uniprot/P21939 P21939]
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** [http://www.uniprot.org/uniprot/P29444 P29444]
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** [http://www.uniprot.org/uniprot/Q9X714 Q9X714]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=xylulose kinase}}
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{{#set: ec number=EC-2.7.1.17}}
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{{#set: gene associated=Ec-01_002810}}
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{{#set: in pathway=DARABITOLUTIL-PWY|LARABITOLUTIL-PWY|XYLCAT-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:20, 21 March 2018

Pathway PWY-7380

  • taxonomic range:
  • common name:
    • biotin biosynthesis from 8-amino-7-oxononanoate II
  • Synonym(s):
    • biotin biosynthesis from 7-keto-8-aminopelargonate II

Reaction(s) found

2 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-7380&oldid=26259"