Difference between revisions of "Ec-19 002930"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2PTERIDINEPYROPHOSPHOKIN-RXN H2PTERIDINEPYROPHOSPHOKIN-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
(Created page with "Category:Gene == Gene Ec-19_002930 == * left end position: ** 3202684 * transcription direction: ** POSITIVE * right end position: ** 3212669 * centisome position: ** 53.6...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2PTERIDINEPYROPHOSPHOKIN-RXN H2PTERIDINEPYROPHOSPHOKIN-RXN] ==
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== Gene Ec-19_002930 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3202684
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* common name:
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* transcription direction:
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** 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.7.6.3 EC-2.7.6.3]
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** 3212669
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* centisome position:
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** 53.640114   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0035_0144
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** Esi0035_0144
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PEPCARBOXYKIN-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[AMINO-OH-HYDROXYMETHYL-DIHYDROPTERIDINE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[DIHYDROPTERIN-CH2OH-PP]][c] '''+''' 1 [[PROTON]][c]
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* With common name(s):
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** 1 ATP[c] '''+''' 1 6-(hydroxymethyl)-7,8-dihydropterin[c] '''=>''' 1 AMP[c] '''+''' 1 (7,8-dihydropterin-6-yl)methyl diphosphate[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-12_000230]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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*** Assignment: go-term
 
** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
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== Pathways ==
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== Pathways associated ==
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* [[PWY-7539]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7539 PWY-7539]
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* [[PWY-561]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[GLUCONEO-PWY]]
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* [[PWY-6797]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6797 PWY-6797]
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* [[PWY-7117]]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6147]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6147 PWY-6147]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=3202684}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11412 11412]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=3212669}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03503 R03503]
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{{#set: centisome position=53.640114    }}
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* UNIPROT:
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{{#set: common name=Esi_0035_0144|Esi0035_0144}}
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** [http://www.uniprot.org/uniprot/P22291 P22291]
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{{#set: reaction associated=PEPCARBOXYKIN-RXN}}
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** [http://www.uniprot.org/uniprot/P26281 P26281]
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{{#set: pathway associated=PWY-561|GLUCONEO-PWY|PWY-7117}}
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** [http://www.uniprot.org/uniprot/O84619 O84619]
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** [http://www.uniprot.org/uniprot/Q9ZM35 Q9ZM35]
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** [http://www.uniprot.org/uniprot/Q9RXY4 Q9RXY4]
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** [http://www.uniprot.org/uniprot/O66550 O66550]
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** [http://www.uniprot.org/uniprot/O25680 O25680]
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** [http://www.uniprot.org/uniprot/Q9PJ54 Q9PJ54]
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** [http://www.uniprot.org/uniprot/Q9JV81 Q9JV81]
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** [http://www.uniprot.org/uniprot/P64143 P64143]
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** [http://www.uniprot.org/uniprot/Q9Z7E8 Q9Z7E8]
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** [http://www.uniprot.org/uniprot/P82602 P82602]
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** [http://www.uniprot.org/uniprot/P29252 P29252]
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** [http://www.uniprot.org/uniprot/P72736 P72736]
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** [http://www.uniprot.org/uniprot/O04862 O04862]
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** [http://www.uniprot.org/uniprot/Q9SZV3 Q9SZV3]
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** [http://www.uniprot.org/uniprot/Q9X8I1 Q9X8I1]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase}}
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{{#set: ec number=EC-2.7.6.3}}
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{{#set: gene associated=Ec-12_000230}}
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{{#set: in pathway=PWY-7539|PWY-6797|PWY-6147}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:20, 21 March 2018

Gene Ec-19_002930

  • left end position:
    • 3202684
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3212669
  • centisome position:
    • 53.640114
  • Synonym(s):
    • Esi_0035_0144
    • Esi0035_0144

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-19_002930&oldid=26269"