Difference between revisions of "RXN-12178"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4521 PWY-4521] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12178 RXN-12178] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycosyl hydrolase, family...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4521 PWY-4521] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12178 RXN-12178] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** arsenite oxidation I (respiratory)
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** Glycosyl hydrolase, family 88
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* ec number:
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** [http://enzyme.expasy.org/EC/3.2.1.179 EC-3.2.1.179]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''2''' reactions in the full pathway
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* With identifiers:
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* [[CYTOCHROME-C-OXIDASE-RXN]]
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** 1 [[CPD-36]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-13122]][c] '''+''' 1 [[N-acetyl-D-galactosamine]][c]
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** 3 associated gene(s):
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* With common name(s):
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*** [[Ec-01_001120]]
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** 1 4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine[c] '''+''' 1 H2O[c] '''=>''' 1 4-deoxy-L-threo-hex-4-enopyranuronate[c] '''+''' 1 N-acetyl-D-galactosamine[c]
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*** [[Ec-21_005020]]
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*** [[Ec-07_006760]]
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== Genes associated with this reaction  ==
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** 1 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-esiliculosus_genome]]
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* Gene: [[Ec-02_002970]]
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== Reaction(s) not found ==
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12586 RXN-12586]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-02_002980]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-7646]], dermatan sulfate degradation I (bacterial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7646 PWY-7646]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6572]], chondroitin sulfate degradation I (bacterial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6572 PWY-6572]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2}}
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* RHEA:
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{{#set: common name=arsenite oxidation I (respiratory)}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31654 31654]
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{{#set: reaction found=1}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: total reaction=2}}
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{{#set: common name=Glycosyl hydrolase, family 88}}
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{{#set: completion rate=50.0}}
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{{#set: ec number=EC-3.2.1.179}}
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{{#set: gene associated=Ec-02_002970|Ec-02_002980}}
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{{#set: in pathway=PWY-7646|PWY-6572}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:22, 21 March 2018

Reaction RXN-12178

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glycosyl hydrolase, family 88
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine[c] + 1 H2O[c] => 1 4-deoxy-L-threo-hex-4-enopyranuronate[c] + 1 N-acetyl-D-galactosamine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7646, dermatan sulfate degradation I (bacterial): PWY-7646
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-6572, chondroitin sulfate degradation I (bacterial): PWY-6572
    • 1 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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