Difference between revisions of "VALSYN-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROXYISOVALDEHYDRAT-RXN DIHYDROXYISOVALDEHYDRAT-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=VALSYN-PWY VALSYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TA...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROXYISOVALDEHYDRAT-RXN DIHYDROXYISOVALDEHYDRAT-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=VALSYN-PWY VALSYN-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
* common name:
 
* common name:
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** Dihydroxy-acid/6-phosphogluconate dehydratase
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** L-valine biosynthesis
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* ec number:
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** [http://enzyme.expasy.org/EC/4.2.1.9 EC-4.2.1.9]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''4''' reactions in the full pathway
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** 1 [[CPD-13357]][c] '''=>''' 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[WATER]][c]
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* [[ACETOLACTREDUCTOISOM-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 (2R)-2,3-dihydroxy-3-methylbutanoate[c] '''=>''' 1 3-methyl-2-oxobutanoate[c] '''+''' 1 H2O[c]
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*** [[Ec-09_003170]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[ACETOLACTSYN-RXN]]
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* Gene: [[Ec-03_000220]]
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** 0 associated gene:
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** Source: [[annotation-esiliculosus_genome]]
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** 1 reconstruction source(s) associated:
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*** Assignment: EC-NUMBER
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*** [[annotation-esiliculosus_genome]]
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** Source: [[orthology-aragem]]
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* [[BRANCHED-CHAINAMINOTRANSFERVAL-RXN]]
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== Pathways  ==
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** 4 associated gene(s):
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* [[VALSYN-PWY]], L-valine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=VALSYN-PWY VALSYN-PWY]
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*** [[Ec-12_005560]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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*** [[Ec-12_005530]]
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* [[PWY-7111]], pyruvate fermentation to isobutanol (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7111 PWY-7111]
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*** [[Ec-12_005520]]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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*** [[Ec-20_001390]]
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== Reconstruction information  ==
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** 1 reconstruction source(s) associated:
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* Category: [[orthology]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[orthology-aragem]]
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* [[DIHYDROXYISOVALDEHYDRAT-RXN]]
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*** Tool: [[pantograph]]
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** 1 associated gene(s):
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* Category: [[annotation]]
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*** [[Ec-03_000220]]
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** Source: [[annotation-esiliculosus_genome]]
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** 2 reconstruction source(s) associated:
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*** Tool: [[pathwaytools]]
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* ECOCYC:
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** [http://www.genome.jp/dbget-bin/www_bget?R04441 R04441]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=VALSYN-PWY VALSYN-PWY]
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* UNIPROT:
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{{#set: taxonomic range=TAX-2157}}
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** [http://www.uniprot.org/uniprot/P55186 P55186]
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{{#set: taxonomic range=TAX-2}}
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** [http://www.uniprot.org/uniprot/Q9JUE0 Q9JUE0]
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{{#set: taxonomic range=TAX-2759}}
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** [http://www.uniprot.org/uniprot/P05791 P05791]
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{{#set: common name=L-valine biosynthesis}}
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** [http://www.uniprot.org/uniprot/Q9UZ03 Q9UZ03]
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{{#set: reaction found=4}}
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** [http://www.uniprot.org/uniprot/P44851 P44851]
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{{#set: total reaction=4}}
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** [http://www.uniprot.org/uniprot/Q02139 Q02139]
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/Q9PJ98 Q9PJ98]
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** [http://www.uniprot.org/uniprot/P39522 P39522]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Dihydroxy-acid/6-phosphogluconate dehydratase}}
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{{#set: ec number=EC-4.2.1.9}}
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{{#set: gene associated=Ec-03_000220}}
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{{#set: in pathway=VALSYN-PWY|PWY-7111}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:22, 21 March 2018

Pathway VALSYN-PWY

Reaction(s) found

4 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=VALSYN-PWY&oldid=26479"