Difference between revisions of "GLYCOLATE-REDUCTASE-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DELTA3-ISOPENTENYL-PP DELTA3-ISOPENTENYL-PP] == * smiles: ** C=C(C)CCOP([O-])(=O)OP([O-])(=O)[O...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLATE-REDUCTASE-RXN GLYCOLATE-REDUCTASE-RXN] == * direction: ** REVERSIBLE * ec number: ** [htt...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DELTA3-ISOPENTENYL-PP DELTA3-ISOPENTENYL-PP] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLATE-REDUCTASE-RXN GLYCOLATE-REDUCTASE-RXN] ==
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* smiles:
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* direction:
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** C=C(C)CCOP([O-])(=O)OP([O-])(=O)[O-]
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** REVERSIBLE
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* inchi key:
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* ec number:
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** InChIKey=NUHSROFQTUXZQQ-UHFFFAOYSA-K
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** [http://enzyme.expasy.org/EC/1.1.1.26 EC-1.1.1.26]
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* common name:
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** isopentenyl diphosphate
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* molecular weight:
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** 243.069   
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* Synonym(s):
 
* Synonym(s):
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** isopentenyl-pp
 
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** isopentenyl pyrophosphate
 
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** IPP
 
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** δ(3)-isopentenyl-PP
 
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** Δ3-isopentenyl-PP
 
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** 3-methylbut-3-enyl diphosphate
 
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** 3-methylbut-3-enyl pyrophosphate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[FPPSYN-RXN]]
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* With identifiers:
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* [[RXN-8999]]
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** 1 [[NAD]][c] '''+''' 1 [[GLYCOLLATE]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[GLYOX]][c] '''+''' 1 [[PROTON]][c]
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* [[TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN]]
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* With common name(s):
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* [[RXN-11486]]
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** 1 NAD+[c] '''+''' 1 glycolate[c] '''<=>''' 1 NADH[c] '''+''' 1 glyoxylate[c] '''+''' 1 H+[c]
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* [[FARNESYLTRANSTRANSFERASE-RXN]]
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== Reaction(s) known to produce the compound ==
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== Genes associated with this reaction  ==
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* [[DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN]]
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== Pathways  ==
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* [[ISPH2-RXN]]
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* [[PWY-7295]], L-arabinose degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7295 PWY-7295]
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== Reaction(s) of unknown directionality ==
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** '''3''' reactions found over '''8''' reactions in the full pathway
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* [[IPPISOM-RXN]]
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* [[PWY-7294]], xylose degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7294 PWY-7294]
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* [[RXN0-5180]]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* [[GPPSYN-RXN]]
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== Reconstruction information  ==
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* Category: [[gap-filling]]
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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*** Tool: [[meneco]]
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**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
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* BIGG : 33956
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18229 18229]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=15983957 15983957]
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* LIGAND-RXN:
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* HMDB : HMDB01347
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** [http://www.genome.jp/dbget-bin/www_bget?R00717 R00717]
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* LIGAND-CPD:
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{{#set: direction=REVERSIBLE}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00129 C00129]
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{{#set: ec number=EC-1.1.1.26}}
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* CHEMSPIDER:
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{{#set: in pathway=PWY-7295|PWY-7294}}
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** [http://www.chemspider.com/Chemical-Structure.13115335.html 13115335]
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{{#set: reconstruction category=gap-filling}}
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* CHEBI:
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{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=128769 128769]
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{{#set: reconstruction tool=meneco}}
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* METABOLIGHTS : MTBLC128769
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{{#set: reconstruction comment=added for gapfilling}}
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{{#set: smiles=C=C(C)CCOP([O-])(=O)OP([O-])(=O)[O-]}}
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{{#set: inchi key=InChIKey=NUHSROFQTUXZQQ-UHFFFAOYSA-K}}
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{{#set: common name=isopentenyl diphosphate}}
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{{#set: molecular weight=243.069    }}
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{{#set: common name=isopentenyl-pp|isopentenyl pyrophosphate|IPP|&delta;(3)-isopentenyl-PP|&Delta;3-isopentenyl-PP|3-methylbut-3-enyl diphosphate|3-methylbut-3-enyl pyrophosphate}}
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{{#set: consumed by=FPPSYN-RXN|RXN-8999|TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN|RXN-11486|FARNESYLTRANSTRANSFERASE-RXN}}
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{{#set: produced by=DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN|ISPH2-RXN}}
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{{#set: reversible reaction associated=IPPISOM-RXN|RXN0-5180|GPPSYN-RXN}}
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Latest revision as of 19:22, 21 March 2018

Reaction GLYCOLATE-REDUCTASE-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 glycolate[c] <=> 1 NADH[c] + 1 glyoxylate[c] + 1 H+[c]

Genes associated with this reaction

Pathways

  • PWY-7295, L-arabinose degradation IV: PWY-7295
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-7294, xylose degradation IV: PWY-7294
    • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

External links




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