Difference between revisions of "RXN-12729"
From metabolic_network
(Created page with "Category:Gene == Gene Ec-27_001730 == * left end position: ** 1421133 * transcription direction: ** POSITIVE * right end position: ** 1437280 * centisome position: ** 22.0...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12729 RXN-12729] == * direction: ** LEFT-TO-RIGHT * common name: ** Cystathionine beta-lyase **...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12729 RXN-12729] == |
| − | * | + | * direction: |
| − | ** | + | ** LEFT-TO-RIGHT |
| − | * | + | * common name: |
| − | ** | + | ** Cystathionine beta-lyase |
| − | + | ** Cys/Met metabolism, pyridoxal phosphate-dependent enzyme | |
| − | ** | + | * ec number: |
| − | * | + | ** [http://enzyme.expasy.org/EC/4.4.1.8 EC-4.4.1.8] |
| − | ** | + | |
* Synonym(s): | * Synonym(s): | ||
| − | |||
| − | |||
| − | == | + | == Reaction Formula == |
| − | * | + | * With identifiers: |
| + | ** 1 [[WATER]][c] '''+''' 1 [[CPD-13717]][c] '''=>''' 1 [[PYRUVATE]][c] '''+''' 1 [[SELENOHOMOCYSTEINE]][c] '''+''' 1 [[AMMONIUM]][c] | ||
| + | * With common name(s): | ||
| + | ** 1 H2O[c] '''+''' 1 L-selenocystathionine[c] '''=>''' 1 pyruvate[c] '''+''' 1 seleno-L-homocysteine[c] '''+''' 1 ammonium[c] | ||
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Ec-00_002820]] | ||
| + | ** Source: [[annotation-esiliculosus_genome]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Ec-05_006760]] | ||
| + | ** Source: [[annotation-esiliculosus_genome]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | == Pathways == | ||
| + | * [[PWY-6936]], seleno-amino acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6936 PWY-6936] | ||
| + | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[annotation]] | ||
** Source: [[annotation-esiliculosus_genome]] | ** Source: [[annotation-esiliculosus_genome]] | ||
| − | *** | + | *** Tool: [[pathwaytools]] |
| − | + | ||
== External links == | == External links == | ||
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=Cystathionine beta-lyase}} |
| − | {{#set: | + | {{#set: common name=Cys/Met metabolism, pyridoxal phosphate-dependent enzyme}} |
| − | {{#set: | + | {{#set: ec number=EC-4.4.1.8}} |
| − | {{#set: | + | {{#set: gene associated=Ec-00_002820|Ec-05_006760}} |
| − | {{#set: | + | {{#set: in pathway=PWY-6936}} |
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-esiliculosus_genome}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 19:24, 21 March 2018
Contents
Reaction RXN-12729
- direction:
- LEFT-TO-RIGHT
- common name:
- Cystathionine beta-lyase
- Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 WATER[c] + 1 CPD-13717[c] => 1 PYRUVATE[c] + 1 SELENOHOMOCYSTEINE[c] + 1 AMMONIUM[c]
- With common name(s):
- 1 H2O[c] + 1 L-selenocystathionine[c] => 1 pyruvate[c] + 1 seleno-L-homocysteine[c] + 1 ammonium[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Ec-00_002820
- Source: annotation-esiliculosus_genome
- Assignment: EC-NUMBER
- Source: annotation-esiliculosus_genome
- Gene: Ec-05_006760
- Source: annotation-esiliculosus_genome
- Assignment: EC-NUMBER
- Source: annotation-esiliculosus_genome
Pathways
- PWY-6936, seleno-amino acid biosynthesis: PWY-6936
- 4 reactions found over 5 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-esiliculosus_genome
- Tool: pathwaytools
- Source: annotation-esiliculosus_genome
