Difference between revisions of "RXN-10642"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5189 PWY-5189] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1883 TAX-18...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10642 RXN-10642] == * direction: ** REVERSIBLE * common name: ** Uroporphyrinogen decarboxylase...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5189 PWY-5189] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10642 RXN-10642] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1883 TAX-1883]
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33630 TAX-33630]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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* common name:
 
* common name:
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** tetrapyrrole biosynthesis II (from glycine)
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** Uroporphyrinogen decarboxylase, chloroplast precursor
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* ec number:
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** [http://enzyme.expasy.org/EC/4.1.1.37 EC-4.1.1.37]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''3''' reactions found over '''4''' reactions in the full pathway
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* With identifiers:
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* [[OHMETHYLBILANESYN-RXN]]
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** 4 [[PROTON]][c] '''+''' 1 [[CPD-11444]][c] '''<=>''' 1 [[COPROPORPHYRINOGEN_I]][c] '''+''' 4 [[CARBON-DIOXIDE]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Ec-25_002760]]
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** 4 H+[c] '''+''' 1 uroporphyrinogen-I[c] '''<=>''' 1 coproporphyrinogen I[c] '''+''' 4 CO2[c]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** [[orthology-aragem]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PORPHOBILSYNTH-RXN]]
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* Gene: [[Ec-24_000620]]
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** 1 associated gene(s):
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-00_001750]]
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*** Assignment: EC-NUMBER
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** 2 reconstruction source(s) associated:
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* Gene: [[Ec-24_000650]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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*** Assignment: EC-NUMBER
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* [[UROGENIIISYN-RXN]]
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* Gene: [[Ec-01_000360]]
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** 1 associated gene(s):
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-12_004890]]
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*** Assignment: EC-NUMBER
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** 1 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-esiliculosus_genome]]
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== Reconstruction information  ==
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== Reaction(s) not found ==
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* Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=5-AMINOLEVULINIC-ACID-SYNTHASE-RXN 5-AMINOLEVULINIC-ACID-SYNTHASE-RXN]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-1883}}
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* RHEA:
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{{#set: taxonomic range=TAX-33682}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31239 31239]
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{{#set: taxonomic range=TAX-33630}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-1224}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04972 R04972]
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{{#set: taxonomic range=TAX-33208}}
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{{#set: direction=REVERSIBLE}}
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{{#set: taxonomic range=TAX-4751}}
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{{#set: common name=Uroporphyrinogen decarboxylase, chloroplast precursor}}
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{{#set: common name=tetrapyrrole biosynthesis II (from glycine)}}
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{{#set: ec number=EC-4.1.1.37}}
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{{#set: reaction found=3}}
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{{#set: gene associated=Ec-24_000620|Ec-24_000650|Ec-01_000360}}
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{{#set: total reaction=4}}
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{{#set: in pathway=}}
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{{#set: completion rate=75.0}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:25, 21 March 2018

Reaction RXN-10642

  • direction:
    • REVERSIBLE
  • common name:
    • Uroporphyrinogen decarboxylase, chloroplast precursor
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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