Difference between revisions of "Ec-21 003740"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-93 RXN1F-93] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:Gene == Gene Ec-21_003740 == * left end position: ** 4732928 * transcription direction: ** POSITIVE * right end position: ** 4743041 * centisome position: ** 64.1...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-93 RXN1F-93] ==
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== Gene Ec-21_003740 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4732928
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.14.11.23 EC-1.14.11.23]
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** POSITIVE
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* right end position:
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** 4743041
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* centisome position:
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** 64.13078   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0072_0110
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** Esi0072_0110
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** NFS
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-12587]]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[DIHYDROKAEMPFEROL-CMPD]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[CPD1F-90]][c] '''+''' 1 [[WATER]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 oxygen[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 (+)-dihydrokaempferol[c] '''=>''' 1 H+[c] '''+''' 1 CO2[c] '''+''' 1 succinate[c] '''+''' 1 kaempferol[c] '''+''' 1 H2O[c]
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* Reaction: [[RXN-12588]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-14382]]
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* Gene: [[Ec-19_002760]]
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** Source: [[annotation-esiliculosus_genome]]
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** Source: [[orthology-aragem]]
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*** Assignment: ec-number
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* Gene: [[Ec-08_003510]]
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* Reaction: [[RXN-14384]]
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** Source: [[orthology-aragem]]
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** Source: [[annotation-esiliculosus_genome]]
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* Gene: [[Ec-19_002750]]
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*** Assignment: ec-number
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-14385]]
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== Pathways  ==
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY-3101]], flavonol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3101 PWY-3101]
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*** Assignment: ec-number
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* Reaction: [[RXN-14386]]
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* [[PWY-6787]], flavonoid biosynthesis (in equisetum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6787 PWY-6787]
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** Source: [[annotation-esiliculosus_genome]]
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** '''6''' reactions found over '''10''' reactions in the full pathway
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*** Assignment: ec-number
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== Reconstruction information  ==
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* Reaction: [[RXN-15881]]
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* Category: [[orthology]]
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** Source: [[annotation-esiliculosus_genome]]
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** Source: [[orthology-aragem]]
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*** Assignment: ec-number
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*** Tool: [[pantograph]]
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* Reaction: [[RXN-9787]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN0-308]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY0-1021]]
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* [[PWY-6823]]
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* [[PWY-7250]]
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* [[PWY-6892]]
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* [[PWY-6891]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=4732928}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03126 R03126]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=4743041}}
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{{#set: ec number=EC-1.14.11.23}}
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{{#set: centisome position=64.13078    }}
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{{#set: gene associated=Ec-19_002760|Ec-08_003510|Ec-19_002750}}
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{{#set: common name=Esi_0072_0110|Esi0072_0110|NFS}}
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{{#set: in pathway=PWY-3101|PWY-6787}}
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{{#set: reaction associated=RXN-12587|RXN-12588|RXN-14382|RXN-14384|RXN-14385|RXN-14386|RXN-15881|RXN-9787|RXN0-308}}
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{{#set: reconstruction category=orthology}}
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{{#set: pathway associated=PWY0-1021|PWY-6823|PWY-7250|PWY-6892|PWY-6891}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:26, 21 March 2018

Gene Ec-21_003740

  • left end position:
    • 4732928
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4743041
  • centisome position:
    • 64.13078
  • Synonym(s):
    • Esi_0072_0110
    • Esi0072_0110
    • NFS

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-21_003740&oldid=26920"