Difference between revisions of "GLURS-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14116 RXN-14116] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLURS-RXN GLURS-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glutamate-tRNA ligase * ec...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14116 RXN-14116] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLURS-RXN GLURS-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** glutamate-tRNA ligase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.2.1.88 EC-1.2.1.88]
+
** [http://enzyme.expasy.org/EC/6.1.1.17 EC-6.1.1.17]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[GLT]][c] '''+''' 2 [[PROTON]][c]
+
** 1 [[GLT-tRNAs]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[Charged-GLT-tRNAs]][c] '''+''' 1 [[AMP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-glutamate-5-semialdehyde[c] '''+''' 1 NAD+[c] '''+''' 1 H2O[c] '''=>''' 1 NADH[c] '''+''' 1 L-glutamate[c] '''+''' 2 H+[c]
+
** 1 a tRNAglu[c] '''+''' 1 L-glutamate[c] '''+''' 1 H+[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 an L-glutamyl-[tRNAGlu][c] '''+''' 1 AMP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-06_008480]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
−
* [[PROUT-PWY]], L-proline degradation: [http://metacyc.org/META/NEW-IMAGE?object=PROUT-PWY PROUT-PWY]
+
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
−
* [[ARGASEDEG-PWY]], L-arginine degradation I (arginase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGASEDEG-PWY ARGASEDEG-PWY]
+
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-6853]], ethylene biosynthesis II (microbes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6853 PWY-6853]
+
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 27: Line 31:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30236 30236]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23540 23540]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00245 R00245]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05578 R05578]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P47700 P47700]
 +
** [http://www.uniprot.org/uniprot/O52914 O52914]
 +
** [http://www.uniprot.org/uniprot/P43818 P43818]
 +
** [http://www.uniprot.org/uniprot/O26157 O26157]
 +
** [http://www.uniprot.org/uniprot/Q9ZLJ1 Q9ZLJ1]
 +
** [http://www.uniprot.org/uniprot/O25360 O25360]
 +
** [http://www.uniprot.org/uniprot/O51345 O51345]
 +
** [http://www.uniprot.org/uniprot/Q9Z7Z3 Q9Z7Z3]
 +
** [http://www.uniprot.org/uniprot/P96551 P96551]
 +
** [http://www.uniprot.org/uniprot/O67271 O67271]
 +
** [http://www.uniprot.org/uniprot/O83679 O83679]
 +
** [http://www.uniprot.org/uniprot/Q9ZLZ7 Q9ZLZ7]
 +
** [http://www.uniprot.org/uniprot/Q9PP78 Q9PP78]
 +
** [http://www.uniprot.org/uniprot/Q9CDZ7 Q9CDZ7]
 +
** [http://www.uniprot.org/uniprot/O84451 O84451]
 +
** [http://www.uniprot.org/uniprot/Q9X2I8 Q9X2I8]
 +
** [http://www.uniprot.org/uniprot/Q9JWT4 Q9JWT4]
 +
** [http://www.uniprot.org/uniprot/Q9ZDK3 Q9ZDK3]
 +
** [http://www.uniprot.org/uniprot/Q9X172 Q9X172]
 +
** [http://www.uniprot.org/uniprot/Q58772 Q58772]
 +
** [http://www.uniprot.org/uniprot/Q9ZCT8 Q9ZCT8]
 +
** [http://www.uniprot.org/uniprot/P59690 P59690]
 +
** [http://www.uniprot.org/uniprot/Q43768 Q43768]
 +
** [http://www.uniprot.org/uniprot/Q43794 Q43794]
 +
** [http://www.uniprot.org/uniprot/P46655 P46655]
 +
** [http://www.uniprot.org/uniprot/P48525 P48525]
 +
** [http://www.uniprot.org/uniprot/P75114 P75114]
 +
** [http://www.uniprot.org/uniprot/Q49061 Q49061]
 +
** [http://www.uniprot.org/uniprot/P22249 P22249]
 +
** [http://www.uniprot.org/uniprot/P22250 P22250]
 +
** [http://www.uniprot.org/uniprot/P04805 P04805]
 +
** [http://www.uniprot.org/uniprot/P07814 P07814]
 +
** [http://www.uniprot.org/uniprot/P15189 P15189]
 +
** [http://www.uniprot.org/uniprot/O65253 O65253]
 +
** [http://www.uniprot.org/uniprot/O68055 O68055]
 +
** [http://www.uniprot.org/uniprot/O68142 O68142]
 +
** [http://www.uniprot.org/uniprot/O86528 O86528]
 +
** [http://www.uniprot.org/uniprot/O13775 O13775]
 +
** [http://www.uniprot.org/uniprot/Q9ZFA3 Q9ZFA3]
 +
** [http://www.uniprot.org/uniprot/O82462 O82462]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-1.2.1.88}}
+
{{#set: common name=glutamate-tRNA ligase}}
−
{{#set: in pathway=PROUT-PWY|ARGASEDEG-PWY|PWY-6853}}
+
{{#set: ec number=EC-6.1.1.17}}
 +
{{#set: gene associated=Ec-06_008480}}
 +
{{#set: in pathway=TRNA-CHARGING-PWY|PWY-5188}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:26, 21 March 2018

Reaction GLURS-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • glutamate-tRNA ligase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a tRNAglu[c] + 1 L-glutamate[c] + 1 H+[c] + 1 ATP[c] => 1 diphosphate[c] + 1 an L-glutamyl-[tRNAGlu][c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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