Difference between revisions of "RXN-13299"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6443 PWY-6443] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-31...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13299 RXN-13299] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
Line 1: Line 1:
[[Category:Pathway]]
+
[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6443 PWY-6443] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13299 RXN-13299] ==
* taxonomic range:
+
* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
+
** LEFT-TO-RIGHT
* common name:
+
* ec number:
** benzoate biosynthesis I (CoA-dependent, β-oxidative)
+
** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
 
* Synonym(s):
 
* Synonym(s):
** benzoic acid biosynthesis
 
  
== Reaction(s) found ==
+
== Reaction Formula ==
'''2''' reactions found over '''9''' reactions in the full pathway
+
* With identifiers:
* [[PWY-6457]]
+
** 1 [[CPD-10283]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CPD-14276]][c]
** 0 associated gene:
+
* With common name(s):
* [[RXN-2006]]
+
** 1 3-oxo-behenoyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 (3R)-3-hydroxy-behenoyl-CoA[c]
** 1 associated gene(s):
+
 
*** [[Ec-26_003940]]
+
== Genes associated with this reaction  ==
** 1 reconstruction source(s) associated:
+
== Pathways  ==
*** [[orthology-aragem]]
+
* [[PWY-7036]], very long chain fatty acid biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7036 PWY-7036]
== Reaction(s) not found ==
+
** '''4''' reactions found over '''16''' reactions in the full pathway
* [http://metacyc.org/META/NEW-IMAGE?object=BENZOATE--COA-LIGASE-RXN BENZOATE--COA-LIGASE-RXN]
+
== Reconstruction information  ==
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11272 RXN-11272]
+
* Category: [[gap-filling]]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2002 RXN-2002]
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2003 RXN-2003]
+
*** Tool: [[meneco]]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2005 RXN-2005]
+
**** Comment: [[added for gapfilling]]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-6724 RXN-6724]
+
 
== External links  ==
 
== External links  ==
* PLANTCYC : PWY-6443
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: taxonomic range=TAX-3193}}
+
{{#set: ec number=EC-1.1.1.330}}
{{#set: common name=benzoate biosynthesis I (CoA-dependent, β-oxidative)}}
+
{{#set: in pathway=PWY-7036}}
{{#set: common name=benzoic acid biosynthesis}}
+
{{#set: reconstruction category=gap-filling}}
{{#set: reaction found=2}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
{{#set: total reaction=9}}
+
{{#set: reconstruction tool=meneco}}
{{#set: completion rate=22.0}}
+
{{#set: reconstruction comment=added for gapfilling}}

Latest revision as of 19:29, 21 March 2018

Reaction RXN-13299

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3-oxo-behenoyl-CoA[c] + 1 H+[c] + 1 NADPH[c] => 1 NADP+[c] + 1 (3R)-3-hydroxy-behenoyl-CoA[c]

Genes associated with this reaction

Pathways

  • PWY-7036, very long chain fatty acid biosynthesis II: PWY-7036
    • 4 reactions found over 16 reactions in the full pathway

Reconstruction information

External links