Difference between revisions of "RXN-12399"
From metabolic_network
(Created page with "Category:Gene == Gene Ec-05_001850 == * left end position: ** 3306265 * transcription direction: ** NEGATIVE * right end position: ** 3325179 * centisome position: ** 36.3...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12399 RXN-12399] == * direction: ** LEFT-TO-RIGHT * common name: ** xyloglucan XLXG oligosaccha...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12399 RXN-12399] == |
| − | * | + | * direction: |
| − | ** | + | ** LEFT-TO-RIGHT |
| − | * | + | * common name: |
| − | ** | + | ** xyloglucan XLXG oligosaccharide β-galactosidase |
| − | * | + | ** Glycoside hydrolase-type carbohydrate-binding, subgroup |
| − | ** | + | ** Beta-galactosidase, family GH2 |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/3.2.1.23 EC-3.2.1.23] |
* Synonym(s): | * Synonym(s): | ||
| − | |||
| − | |||
| − | == | + | == Reaction Formula == |
| − | * | + | * With identifiers: |
| + | ** 1 [[WATER]][c] '''+''' 1 [[CPD-13377]][c] '''=>''' 1 [[CPD-13375]][c] '''+''' 1 [[D-galactopyranose]][c] | ||
| + | * With common name(s): | ||
| + | ** 1 H2O[c] '''+''' 1 XLXG xyloglucan oligosaccharide[c] '''=>''' 1 XXXG xyloglucan oligosaccharide[c] '''+''' 1 D-galactopyranose[c] | ||
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Ec-12_007000]] | ||
| + | ** Source: [[annotation-esiliculosus_genome]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Ec-06_001410]] | ||
| + | ** Source: [[annotation-esiliculosus_genome]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | == Pathways == | ||
| + | * [[PWY-6807]], xyloglucan degradation II (exoglucanase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6807 PWY-6807] | ||
| + | ** '''3''' reactions found over '''6''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[annotation]] | ||
** Source: [[annotation-esiliculosus_genome]] | ** Source: [[annotation-esiliculosus_genome]] | ||
| − | *** | + | *** Tool: [[pathwaytools]] |
| − | + | ||
== External links == | == External links == | ||
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=xyloglucan XLXG oligosaccharide β-galactosidase}} |
| − | {{#set: | + | {{#set: common name=Glycoside hydrolase-type carbohydrate-binding, subgroup}} |
| − | {{#set: | + | {{#set: common name=Beta-galactosidase, family GH2}} |
| − | {{#set: | + | {{#set: ec number=EC-3.2.1.23}} |
| − | {{#set: | + | {{#set: gene associated=Ec-12_007000|Ec-06_001410}} |
| + | {{#set: in pathway=PWY-6807}} | ||
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-esiliculosus_genome}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 19:30, 21 March 2018
Contents
Reaction RXN-12399
- direction:
- LEFT-TO-RIGHT
- common name:
- xyloglucan XLXG oligosaccharide β-galactosidase
- Glycoside hydrolase-type carbohydrate-binding, subgroup
- Beta-galactosidase, family GH2
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 WATER[c] + 1 CPD-13377[c] => 1 CPD-13375[c] + 1 D-galactopyranose[c]
- With common name(s):
- 1 H2O[c] + 1 XLXG xyloglucan oligosaccharide[c] => 1 XXXG xyloglucan oligosaccharide[c] + 1 D-galactopyranose[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Ec-12_007000
- Source: annotation-esiliculosus_genome
- Assignment: EC-NUMBER
- Source: annotation-esiliculosus_genome
- Gene: Ec-06_001410
- Source: annotation-esiliculosus_genome
- Assignment: EC-NUMBER
- Source: annotation-esiliculosus_genome
Pathways
- PWY-6807, xyloglucan degradation II (exoglucanase): PWY-6807
- 3 reactions found over 6 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-esiliculosus_genome
- Tool: pathwaytools
- Source: annotation-esiliculosus_genome
