Difference between revisions of "Ec-12 005460"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.8.15-RXN 2.7.8.15-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycosyl transferase,...")
(Created page with "Category:Gene == Gene Ec-12_005460 == * left end position: ** 4980478 * transcription direction: ** NEGATIVE * right end position: ** 4986928 * centisome position: ** 59.7...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.8.15-RXN 2.7.8.15-RXN] ==
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== Gene Ec-12_005460 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4980478
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* common name:
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* transcription direction:
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** Glycosyl transferase, family 4
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.7.8.15 EC-2.7.8.15]
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** 4986928
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* centisome position:
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** 59.746243   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0081_0017
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** Esi0081_0017
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** PAR
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PROTEIN-KINASE-RXN]]
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** 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''+''' 1 [[DOLICHOLP]][c] '''=>''' 1 [[CPD-190]][c] '''+''' 1 [[UMP]][c]
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* With common name(s):
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** 1 UDP-N-acetyl-α-D-glucosamine[c] '''+''' 1 a dolichyl phosphate[c] '''=>''' 1 an N-acetyl-α-D-glucosaminyl-diphosphodolichol[c] '''+''' 1 UMP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-07_007020]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
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** '''19''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=4980478}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13289 13289]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=4986928}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01007 R01007]
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{{#set: centisome position=59.746243    }}
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* UNIPROT:
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{{#set: common name=Esi_0081_0017|Esi0081_0017|PAR}}
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** [http://www.uniprot.org/uniprot/P07286 P07286]
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{{#set: reaction associated=PROTEIN-KINASE-RXN}}
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** [http://www.uniprot.org/uniprot/P23338 P23338]
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** [http://www.uniprot.org/uniprot/P42864 P42864]
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** [http://www.uniprot.org/uniprot/P39465 P39465]
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** [http://www.uniprot.org/uniprot/Q9UY90 Q9UY90]
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** [http://www.uniprot.org/uniprot/Q58513 Q58513]
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** [http://www.uniprot.org/uniprot/P42867 P42867]
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** [http://www.uniprot.org/uniprot/P42881 P42881]
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** [http://www.uniprot.org/uniprot/P96000 P96000]
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** [http://www.uniprot.org/uniprot/Q9M2M5 Q9M2M5]
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** [http://www.uniprot.org/uniprot/O22211 O22211]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Glycosyl transferase, family 4}}
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{{#set: ec number=EC-2.7.8.15}}
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{{#set: gene associated=Ec-07_007020}}
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{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:30, 21 March 2018

Gene Ec-12_005460

  • left end position:
    • 4980478
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4986928
  • centisome position:
    • 59.746243
  • Synonym(s):
    • Esi_0081_0017
    • Esi0081_0017
    • PAR

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-12_005460&oldid=27436"