Difference between revisions of "LINOLENOYL-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SELENOHOMOCYSTEINE SELENOHOMOCYSTEINE] == * smiles: ** C(C[Se])C([N+])C(=O)[O-] * inchi key: **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LINOLENOYL-RXN LINOLENOYL-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** long chain acyl-c...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SELENOHOMOCYSTEINE SELENOHOMOCYSTEINE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LINOLENOYL-RXN LINOLENOYL-RXN] ==
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* smiles:
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* direction:
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** C(C[Se])C([N+])C(=O)[O-]
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=RCWCGLALNCIQNM-VKHMYHEASA-N
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* common name:
 
* common name:
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** seleno-L-homocysteine
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** long chain acyl-coA synthetase
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* molecular weight:
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** long chain acyl-CoA synthetase
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** 181.073   
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* ec number:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
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** 2-amino-4-selanyl-butanoate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-12730]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[LINOLENIC_ACID]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[LINOLENOYL-COA]][c] '''+''' 1 [[PPI]][c]
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* [[RXN-12729]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 coenzyme A[c] '''+''' 1 ATP[c] '''+''' 1 α-linolenate[c] '''=>''' 1 AMP[c] '''+''' 1 α-linolenoyl-CoA[c] '''+''' 1 diphosphate[c]
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* [[RXN-15137]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-02_006430]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-12_008720]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-01_001560]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-03_003710]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-7049]], icosapentaenoate biosynthesis II (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7049 PWY-7049]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7724]], icosapentaenoate biosynthesis III (8-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7724 PWY-7724]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* LIGAND-CPD:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.genome.jp/dbget-bin/www_bget?C05698 C05698]
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{{#set: common name=long chain acyl-coA synthetase}}
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* CHEBI:
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{{#set: common name=long chain acyl-CoA synthetase}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=84850 84850]
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{{#set: ec number=EC-6.2.1.3}}
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* METABOLIGHTS : MTBLC9096
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{{#set: gene associated=Ec-02_006430|Ec-12_008720|Ec-01_001560|Ec-03_003710}}
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* PUBCHEM:
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{{#set: in pathway=PWY-7049|PWY-7724}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90659042 90659042]
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{{#set: reconstruction category=annotation}}
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* HMDB : HMDB04119
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: smiles=C(C[Se])C([N+])C(=O)[O-]}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: inchi key=InChIKey=RCWCGLALNCIQNM-VKHMYHEASA-N}}
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{{#set: common name=seleno-L-homocysteine}}
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{{#set: molecular weight=181.073    }}
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{{#set: common name=2-amino-4-selanyl-butanoate}}
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{{#set: consumed by=RXN-12730}}
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{{#set: produced by=RXN-12729}}
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{{#set: reversible reaction associated=RXN-15137}}
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Latest revision as of 19:31, 21 March 2018

Reaction LINOLENOYL-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • long chain acyl-coA synthetase
    • long chain acyl-CoA synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 ATP[c] + 1 α-linolenate[c] => 1 AMP[c] + 1 α-linolenoyl-CoA[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7049, icosapentaenoate biosynthesis II (6-desaturase, mammals): PWY-7049
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-7724, icosapentaenoate biosynthesis III (8-desaturase, mammals): PWY-7724
    • 1 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=LINOLENOYL-RXN&oldid=27520"