Difference between revisions of "Ec-27 002350"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALLANTOICASE-RXN ALLANTOICASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** allantoicase...")
(Created page with "Category:Gene == Gene Ec-27_002350 == * left end position: ** 2090851 * transcription direction: ** NEGATIVE * right end position: ** 2101115 * centisome position: ** 32.4...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALLANTOICASE-RXN ALLANTOICASE-RXN] ==
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== Gene Ec-27_002350 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2090851
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* common name:
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* transcription direction:
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** allantoicase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/3.5.3.4 EC-3.5.3.4]
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** 2101115
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* centisome position:
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** 32.41676   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0036_0127
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** Esi0036_0127
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[NICOTINATEPRIBOSYLTRANS-RXN]]
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** 1 [[ALLANTOATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[UREA]][c] '''+''' 1 [[CPD-1091]][c]
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* With common name(s):
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** 1 allantoate[c] '''+''' 1 H2O[c] '''=>''' 1 urea[c] '''+''' 1 S-ureidoglycolate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-06_010130]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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*** Assignment: go-term
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== Pathways  ==
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** Source: [[orthology-aragem]]
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* [[PWY-5697]], allantoin degradation to ureidoglycolate I (urea producing): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5697 PWY-5697]
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* Reaction: [[QUINOPRIBOTRANS-RXN]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY-5381]]
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* [[PWY-7342]]
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* [[PYRIDNUCSYN-PWY]]
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* [[PWY-5316]]
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* [[PWY-5653]]
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* [[PYRIDNUCSAL-PWY]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2090851}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11016 11016]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2101115}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02422 R02422]
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{{#set: centisome position=32.41676    }}
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* UNIPROT:
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{{#set: common name=Esi_0036_0127|Esi0036_0127}}
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** [http://www.uniprot.org/uniprot/P18407 P18407]
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{{#set: reaction associated=NICOTINATEPRIBOSYLTRANS-RXN|QUINOPRIBOTRANS-RXN}}
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** [http://www.uniprot.org/uniprot/P25335 P25335]
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{{#set: pathway associated=PWY-5381|PWY-7342|PYRIDNUCSYN-PWY|PWY-5316|PWY-5653|PYRIDNUCSAL-PWY}}
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** [http://www.uniprot.org/uniprot/Q09913 Q09913]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=allantoicase}}
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{{#set: ec number=EC-3.5.3.4}}
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{{#set: gene associated=Ec-06_010130}}
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{{#set: in pathway=PWY-5697}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:32, 21 March 2018

Gene Ec-27_002350

  • left end position:
    • 2090851
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2101115
  • centisome position:
    • 32.41676
  • Synonym(s):
    • Esi_0036_0127
    • Esi0036_0127

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-27_002350&oldid=27606"