Difference between revisions of "Ec-10 002940"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSMET-RXN HOMOCYSMET-RXN] == * direction: ** REVERSIBLE * common name: ** 5-methyltetrahydropt...")
(Created page with "Category:Gene == Gene Ec-10_002940 == * left end position: ** 3014507 * transcription direction: ** NEGATIVE * right end position: ** 3022879 * centisome position: ** 46.3...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSMET-RXN HOMOCYSMET-RXN] ==
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== Gene Ec-10_002940 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 3014507
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* common name:
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* transcription direction:
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** 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
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** NEGATIVE
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** Methionine synthase
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* right end position:
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* ec number:
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** 3022879
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** [http://enzyme.expasy.org/EC/2.1.1.14 EC-2.1.1.14]
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* centisome position:
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** 46.370003   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0174_0056
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** Esi0174_0056
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.1.3.16-RXN]]
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** 1 [[CPD-1302]][c] '''+''' 1 [[HOMO-CYS]][c] '''<=>''' 1 [[CPD-1301]][c] '''+''' 1 [[MET]][c]
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* With common name(s):
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** 1 N5-methyl--tetrahydropteroyl tri-L-glutamate[c] '''+''' 1 L-homocysteine[c] '''<=>''' 1 tetrahydropteroyl tri-L-glutamate[c] '''+''' 1 L-methionine[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-06_000970]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-28_003190]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[PWY-702]], L-methionine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-702 PWY-702]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-METSYN-PWY HOMOSER-METSYN-PWY]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6151]], S-adenosyl-L-methionine cycle I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6151 PWY-6151]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[HSERMETANA-PWY]], L-methionine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=HSERMETANA-PWY HSERMETANA-PWY]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5041]], S-adenosyl-L-methionine cycle II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5041 PWY-5041]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=3014507}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21196 21196]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=3022879}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04405 R04405]
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{{#set: centisome position=46.370003    }}
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* UNIPROT:
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{{#set: common name=Esi_0174_0056|Esi0174_0056}}
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** [http://www.uniprot.org/uniprot/P25665 P25665]
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{{#set: reaction associated=3.1.3.16-RXN}}
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** [http://www.uniprot.org/uniprot/P45331 P45331]
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** [http://www.uniprot.org/uniprot/Q9PN94 Q9PN94]
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** [http://www.uniprot.org/uniprot/O26869 O26869]
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** [http://www.uniprot.org/uniprot/Q9JUT6 Q9JUT6]
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** [http://www.uniprot.org/uniprot/Q9CG55 Q9CG55]
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** [http://www.uniprot.org/uniprot/P05694 P05694]
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** [http://www.uniprot.org/uniprot/Q42699 Q42699]
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** [http://www.uniprot.org/uniprot/Q39586 Q39586]
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** [http://www.uniprot.org/uniprot/O48613 O48613]
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** [http://www.uniprot.org/uniprot/P93263 P93263]
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** [http://www.uniprot.org/uniprot/Q9UT19 Q9UT19]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase}}
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{{#set: common name=Methionine synthase}}
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{{#set: ec number=EC-2.1.1.14}}
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{{#set: gene associated=Ec-06_000970|Ec-28_003190}}
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{{#set: in pathway=PWY-702|HOMOSER-METSYN-PWY|PWY-6151|HSERMETANA-PWY|PWY-5041}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:33, 21 March 2018

Gene Ec-10_002940

  • left end position:
    • 3014507
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3022879
  • centisome position:
    • 46.370003
  • Synonym(s):
    • Esi_0174_0056
    • Esi0174_0056

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-10_002940&oldid=27721"