Difference between revisions of "RXN-15278"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DHBDEHYD-RXN DHBDEHYD-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Glucose/ribitol dehyd...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15278 RXN-15278] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DHBDEHYD-RXN DHBDEHYD-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15278 RXN-15278] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* common name:
 
** Glucose/ribitol dehydrogenase
 
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/1.3.1.28 EC-1.3.1.28]
+
** [http://enzyme.expasy.org/EC/2.4.1.38 EC-2.4.1.38]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[NAD]][c] '''+''' 1 [[DIHYDRO-DIOH-BENZOATE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[2-3-DIHYDROXYBENZOATE]][c] '''+''' 1 [[NADH]][c]
+
** 1 [[CPD-16494]][c] '''+''' 1 [[CPD-14553]][c] '''=>''' 1 [[UDP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[I-antigens]][c]
 
* With common name(s):
 
* With common name(s):
** 1 NAD+[c] '''+''' 1 (2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate[c] '''=>''' 1 H+[c] '''+''' 1 2,3-dihydroxybenzoate[c] '''+''' 1 NADH[c]
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** 1 N-acetyl-β-D-galactosyl-(1,4)-[N-acetyl-β-D-glucosyl-(1,6)]-N-acetyl-β-D-glucosaminyl-(1,3)-β-D-galactosyl-(1,4)-N-acetyl-β-D-glucosaminyl-R[c] '''+''' 1 UDP-α-D-galactose[c] '''=>''' 1 UDP[c] '''+''' 1 H+[c] '''+''' 1 I antigen[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* Gene: [[Ec-01_004330]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Assignment: EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-5901]], 2,3-dihydroxybenzoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5901 PWY-5901]
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* [[PWY-7434]], terminal O-glycans residues modification: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7434 PWY-7434]
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''10''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23824 23824]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R01505 R01505]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P39071 P39071]
 
** [http://www.uniprot.org/uniprot/P15047 P15047]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Glucose/ribitol dehydrogenase}}
+
{{#set: ec number=EC-2.4.1.38}}
{{#set: ec number=EC-1.3.1.28}}
+
{{#set: in pathway=PWY-7434}}
{{#set: gene associated=Ec-01_004330}}
+
{{#set: in pathway=PWY-5901}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:34, 21 March 2018

Reaction RXN-15278

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 N-acetyl-β-D-galactosyl-(1,4)-[N-acetyl-β-D-glucosyl-(1,6)]-N-acetyl-β-D-glucosaminyl-(1,3)-β-D-galactosyl-(1,4)-N-acetyl-β-D-glucosaminyl-R[c] + 1 UDP-α-D-galactose[c] => 1 UDP[c] + 1 H+[c] + 1 I antigen[c]

Genes associated with this reaction

Pathways

  • PWY-7434, terminal O-glycans residues modification: PWY-7434
    • 10 reactions found over 10 reactions in the full pathway

Reconstruction information

External links