Difference between revisions of "GTP-CYCLOHYDRO-II-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8630 RXN-8630] == * direction: ** LEFT-TO-RIGHT * common name: ** Monooxygenase, FAD-binding **...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GTP-CYCLOHYDRO-II-RXN GTP-CYCLOHYDRO-II-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** GTP...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GTP-CYCLOHYDRO-II-RXN GTP-CYCLOHYDRO-II-RXN] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
− | ** | + | ** GTP cyclohydrolase II |
− | + | ||
* ec number: | * ec number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/3.5.4.25 EC-3.5.4.25] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** | + | ** 3 [[WATER]][c] '''+''' 1 [[GTP]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[PPI]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[DIAMINO-OH-PHOSPHORIBOSYLAMINO-PYR]][c] |
* With common name(s): | * With common name(s): | ||
− | ** | + | ** 3 H2O[c] '''+''' 1 GTP[c] '''=>''' 1 formate[c] '''+''' 1 diphosphate[c] '''+''' 2 H+[c] '''+''' 1 2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * Gene: [[Ec- | + | * Gene: [[Ec-27_004040]] |
+ | ** Source: [[orthology-aragem]] | ||
+ | * Gene: [[Ec-02_005710]] | ||
** Source: [[annotation-esiliculosus_genome]] | ** Source: [[annotation-esiliculosus_genome]] | ||
− | *** Assignment: | + | *** Assignment: GO-TERM |
− | + | ** Source: [[orthology-aragem]] | |
− | ** Source: [[ | + | |
− | + | ||
− | + | ||
− | + | ||
− | + | ||
== Pathways == | == Pathways == | ||
− | * [[PWY- | + | * [[PWY-7539]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7539 PWY-7539] |
− | ** ''' | + | ** '''4''' reactions found over '''5''' reactions in the full pathway |
− | * [[ | + | * [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168] |
− | ** ''' | + | ** '''6''' reactions found over '''9''' reactions in the full pathway |
+ | * [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY] | ||
+ | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * Category: [[orthology]] | ||
+ | ** Source: [[orthology-aragem]] | ||
+ | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
** Source: [[annotation-esiliculosus_genome]] | ** Source: [[annotation-esiliculosus_genome]] | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R00425 R00425] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P0A7I7 P0A7I7] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PNU4 Q9PNU4] | ||
+ | ** [http://www.uniprot.org/uniprot/O08315 O08315] | ||
+ | ** [http://www.uniprot.org/uniprot/O66679 O66679] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PHU4 Q9PHU4] | ||
+ | ** [http://www.uniprot.org/uniprot/O25484 O25484] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A5V0 P0A5V0] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A7I8 P0A7I8] | ||
+ | ** [http://www.uniprot.org/uniprot/P43525 P43525] | ||
+ | ** [http://www.uniprot.org/uniprot/P17620 P17620] | ||
+ | ** [http://www.uniprot.org/uniprot/P38066 P38066] | ||
+ | ** [http://www.uniprot.org/uniprot/P50139 P50139] | ||
+ | ** [http://www.uniprot.org/uniprot/P74104 P74104] | ||
+ | ** [http://www.uniprot.org/uniprot/O24019 O24019] | ||
+ | ** [http://www.uniprot.org/uniprot/P51695 P51695] | ||
+ | ** [http://www.uniprot.org/uniprot/P50855 P50855] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
− | {{#set: common name= | + | {{#set: common name=GTP cyclohydrolase II}} |
− | + | {{#set: ec number=EC-3.5.4.25}} | |
− | {{#set: ec number=EC- | + | {{#set: gene associated=Ec-27_004040|Ec-02_005710}} |
− | {{#set: gene associated=Ec- | + | {{#set: in pathway=PWY-7539|PWY-6168|RIBOSYN2-PWY}} |
− | {{#set: in pathway=PWY- | + | {{#set: reconstruction category=orthology|annotation}} |
− | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}} |
− | {{#set: reconstruction source=annotation-esiliculosus_genome}} | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
− | {{#set: reconstruction tool=pathwaytools}} | + |
Latest revision as of 19:34, 21 March 2018
Contents
Reaction GTP-CYCLOHYDRO-II-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- GTP cyclohydrolase II
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 3 H2O[c] + 1 GTP[c] => 1 formate[c] + 1 diphosphate[c] + 2 H+[c] + 1 2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Ec-27_004040
- Source: orthology-aragem
- Gene: Ec-02_005710
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: orthology-aragem
- Source: annotation-esiliculosus_genome
Pathways
- PWY-7539, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia): PWY-7539
- 4 reactions found over 5 reactions in the full pathway
- PWY-6168, flavin biosynthesis III (fungi): PWY-6168
- 6 reactions found over 9 reactions in the full pathway
- RIBOSYN2-PWY, flavin biosynthesis I (bacteria and plants): RIBOSYN2-PWY
- 8 reactions found over 9 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-aragem
- Tool: pantograph
- Source: orthology-aragem
- Category: annotation
- Source: annotation-esiliculosus_genome
- Tool: pathwaytools
- Source: annotation-esiliculosus_genome
External links
- LIGAND-RXN:
- UNIPROT: